Literature DB >> 29477022

Marine microbes in 4D-using time series observation to assess the dynamics of the ocean microbiome and its links to ocean health.

Pier Luigi Buttigieg1, Eduard Fadeev2, Christina Bienhold2, Laura Hehemann3, Pierre Offre4, Antje Boetius5.   

Abstract

Microbial observation is of high relevance in assessing marine phenomena of scientific and societal concern including ocean productivity, harmful algal blooms, and pathogen exposure. However, we have yet to realise its potential to coherently and comprehensively report on global ocean status. The ability of satellites to monitor the distribution of phytoplankton has transformed our appreciation of microbes as the foundation of key ecosystem services; however, more in-depth understanding of microbial dynamics is needed to fully assess natural and anthropogenically induced variation in ocean ecosystems. While this first synthesis shows that notable efforts exist, vast regions such as the ocean depths, the open ocean, the polar oceans, and most of the Southern Hemisphere lack consistent observation. To secure a coordinated future for a global microbial observing system, existing long-term efforts must be better networked to generate shared bioindicators of the Global Ocean's state and health.
Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2018        PMID: 29477022     DOI: 10.1016/j.mib.2018.01.015

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  8 in total

Review 1.  Tara Oceans: towards global ocean ecosystems biology.

Authors:  Shinichi Sunagawa; Silvia G Acinas; Peer Bork; Chris Bowler; Damien Eveillard; Gabriel Gorsky; Lionel Guidi; Daniele Iudicone; Eric Karsenti; Fabien Lombard; Hiroyuki Ogata; Stephane Pesant; Matthew B Sullivan; Patrick Wincker; Colomban de Vargas
Journal:  Nat Rev Microbiol       Date:  2020-05-12       Impact factor: 60.633

2.  High-Frequency Variability of Bacterioplankton in Response to Environmental Drivers in Red Sea Coastal Waters.

Authors:  Mohd Ikram Ansari; Maria Li Calleja; Luis Silva; Miguel Viegas; David Kamanda Ngugi; Tamara Megan Huete-Stauffer; Xosé Anxelu G Morán
Journal:  Front Microbiol       Date:  2022-03-31       Impact factor: 5.640

3.  Microbial indicators of environmental perturbations in coral reef ecosystems.

Authors:  Bettina Glasl; David G Bourne; Pedro R Frade; Torsten Thomas; Britta Schaffelke; Nicole S Webster
Journal:  Microbiome       Date:  2019-06-21       Impact factor: 14.650

Review 4.  Scientists' warning to humanity: microorganisms and climate change.

Authors:  Ricardo Cavicchioli; William J Ripple; Kenneth N Timmis; Farooq Azam; Lars R Bakken; Matthew Baylis; Michael J Behrenfeld; Antje Boetius; Philip W Boyd; Aimée T Classen; Thomas W Crowther; Roberto Danovaro; Christine M Foreman; Jef Huisman; David A Hutchins; Janet K Jansson; David M Karl; Britt Koskella; David B Mark Welch; Jennifer B H Martiny; Mary Ann Moran; Victoria J Orphan; David S Reay; Justin V Remais; Virginia I Rich; Brajesh K Singh; Lisa Y Stein; Frank J Stewart; Matthew B Sullivan; Madeleine J H van Oppen; Scott C Weaver; Eric A Webb; Nicole S Webster
Journal:  Nat Rev Microbiol       Date:  2019-06-18       Impact factor: 60.633

5.  Comparison of Two 16S rRNA Primers (V3-V4 and V4-V5) for Studies of Arctic Microbial Communities.

Authors:  Eduard Fadeev; Magda G Cardozo-Mino; Josephine Z Rapp; Christina Bienhold; Ian Salter; Verena Salman-Carvalho; Massimiliano Molari; Halina E Tegetmeyer; Pier Luigi Buttigieg; Antje Boetius
Journal:  Front Microbiol       Date:  2021-02-16       Impact factor: 5.640

6.  Impact of preservation method and storage period on ribosomal metabarcoding of marine microbes: Implications for remote automated samplings.

Authors:  Matthias Wietz; Katja Metfies; Christina Bienhold; Christian Wolf; Felix Janssen; Ian Salter; Antje Boetius
Journal:  Front Microbiol       Date:  2022-09-07       Impact factor: 6.064

7.  Seasonal bacterial niche structures and chemolithoautotrophic ecotypes in a North Atlantic fjord.

Authors:  Eric J Raes; Jennifer Tolman; Dhwani Desai; Jenni-Marie Ratten; Jackie Zorz; Brent M Robicheau; Diana Haider; Julie LaRoche
Journal:  Sci Rep       Date:  2022-09-12       Impact factor: 4.996

8.  Seasonal niche differentiation among closely related marine bacteria.

Authors:  Adrià Auladell; Albert Barberán; Ramiro Logares; Esther Garcés; Josep M Gasol; Isabel Ferrera
Journal:  ISME J       Date:  2021-07-20       Impact factor: 10.302

  8 in total

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