Literature DB >> 29475871

On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2.

Thomas Heine1, Juliane Zimmerling2, Anne Ballmann2, Sebastian Bruno Kleeberg2, Christian Rückert3, Tobias Busche3, Anika Winkler3, Jörn Kalinowski3, Ansgar Poetsch4,5, Anika Scholtissek2, Michel Oelschlägel2, Gert Schmidt6, Dirk Tischler1,7.   

Abstract

Among bacteria, only a single styrene-specific degradation pathway has been reported so far. It comprises the activity of styrene monooxygenase, styrene oxide isomerase, and phenylacetaldehyde dehydrogenase, yielding phenylacetic acid as the central metabolite. The alternative route comprises ring-hydroxylating enzymes and yields vinyl catechol as central metabolite, which undergoes meta-cleavage. This was reported to be unspecific and also allows the degradation of benzene derivatives. However, some bacteria had been described to degrade styrene but do not employ one of those routes or only parts of them. Here, we describe a novel "hybrid" degradation pathway for styrene located on a plasmid of foreign origin. As putatively also unspecific, it allows metabolizing chemically analogous compounds (e.g., halogenated and/or alkylated styrene derivatives). Gordonia rubripertincta CWB2 was isolated with styrene as the sole source of carbon and energy. It employs an assembled route of the styrene side-chain degradation and isoprene degradation pathways that also funnels into phenylacetic acid as the central metabolite. Metabolites, enzyme activity, genome, transcriptome, and proteome data reinforce this observation and allow us to understand this biotechnologically relevant pathway, which can be used for the production of ibuprofen.IMPORTANCE The degradation of xenobiotics by bacteria is not only important for bioremediation but also because the involved enzymes are potential catalysts in biotechnological applications. This study reveals a novel degradation pathway for the hazardous organic compound styrene in Gordonia rubripertincta CWB2. This study provides an impressive illustration of horizontal gene transfer, which enables novel metabolic capabilities. This study presents glutathione-dependent styrene metabolization in an (actino-)bacterium. Further, the genomic background of the ability of strain CWB2 to produce ibuprofen is demonstrated.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  genomic island; glutathione S-transferase; glutathione in actinobacteria; horizontal gene transfer; hybrid gene cluster; microbial ibuprofen production; proteomics; styrene monooxygenase; transcriptomics; xenobiotic compounds

Mesh:

Substances:

Year:  2018        PMID: 29475871      PMCID: PMC5930330          DOI: 10.1128/AEM.00154-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  98 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

Review 2.  Formation and detoxification of reactive intermediates in the metabolism of chlorinated ethenes.

Authors:  J E van Hylckama Vlieg; D B Janssen
Journal:  J Biotechnol       Date:  2001-02-13       Impact factor: 3.307

3.  Enhancing Indigo Production by Over-Expression of the Styrene Monooxygenase in Pseudomonas putida.

Authors:  Lei Cheng; Sheng Yin; Min Chen; Baoguo Sun; Shuai Hao; Chengtao Wang
Journal:  Curr Microbiol       Date:  2016-05-06       Impact factor: 2.188

4.  Analysis of the Pseudomonas putida CA-3 proteome during growth on styrene under nitrogen-limiting and non-limiting conditions.

Authors:  Jasmina Nikodinovic-Runic; Michelle Flanagan; Aisling R Hume; Gerard Cagney; Kevin E O'Connor
Journal:  Microbiology       Date:  2009-07-16       Impact factor: 2.777

5.  A glutathione S-transferase with activity towards cis-1, 2-dichloroepoxyethane is involved in isoprene utilization by Rhodococcus sp. strain AD45.

Authors:  J E van Hylckama Vlieg; J Kingma; A J van den Wijngaard; D B Janssen
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

6.  pecS: a locus controlling pectinase, cellulase and blue pigment production in Erwinia chrysanthemi.

Authors:  S Reverchon; W Nasser; J Robert-Baudouy
Journal:  Mol Microbiol       Date:  1994-03       Impact factor: 3.501

7.  The mycobacterial binuclear iron monooxygenases require a specific chaperonin-like protein for functional expression in a heterologous host.

Authors:  Toshiki Furuya; Mika Hayashi; Hisashi Semba; Kuniki Kino
Journal:  FEBS J       Date:  2013-01-02       Impact factor: 5.542

Review 8.  Structural Organization of Enzymes of the Phenylacetate Catabolic Hybrid Pathway.

Authors:  Andrey M Grishin; Miroslaw Cygler
Journal:  Biology (Basel)       Date:  2015-06-12

9.  Identification and characterisation of isoprene-degrading bacteria in an estuarine environment.

Authors:  Antonia Johnston; Andrew T Crombie; Myriam El Khawand; Leanne Sims; Gregg M Whited; Terry J McGenity; J Colin Murrell
Journal:  Environ Microbiol       Date:  2017-07-21       Impact factor: 5.491

10.  ReadXplorer 2-detailed read mapping analysis and visualization from one single source.

Authors:  Rolf Hilker; Kai Bernd Stadermann; Oliver Schwengers; Evgeny Anisiforov; Sebastian Jaenicke; Bernd Weisshaar; Tobias Zimmermann; Alexander Goesmann
Journal:  Bioinformatics       Date:  2016-08-18       Impact factor: 6.937

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  11 in total

1.  Asymmetric Epoxidation and Sulfoxidation Catalyzed by a New Styrene Monooxygenase from Bradyrhizobium.

Authors:  Can Cui; Hui Lin; Wei Pu; Chao Guo; Yan Liu; Xiao-Qiong Pei; Zhong-Liu Wu
Journal:  Appl Biochem Biotechnol       Date:  2020-08-18       Impact factor: 2.926

2.  Data on metal-chelating, -immobilisation and biosorption properties by Gordonia rubripertincta CWB2 in dependency on rare earth adaptation.

Authors:  Ringo Schwabe; Christoph Helmut Rudi Senges; Julia Elisabeth Bandow; Thomas Heine; Henry Lehmann; Oliver Wiche; Michael Schlömann; Gloria Levicán; Dirk Tischler
Journal:  Data Brief       Date:  2020-05-21

3.  Screening for Microbial Metal-Chelating Siderophores for the Removal of Metal Ions from Solutions.

Authors:  Marika Hofmann; Thomas Heine; Luise Malik; Sarah Hofmann; Kristin Joffroy; Christoph Helmut Rudi Senges; Julia Elisabeth Bandow; Dirk Tischler
Journal:  Microorganisms       Date:  2021-01-05

4.  From Rest to Growth: Life Collisions of Gordonia polyisoprenivorans 135.

Authors:  Nataliya E Suzina; Vladimir V Sorokin; Valentina N Polivtseva; Violetta V Klyueva; Elena V Emelyanova; Inna P Solyanikova
Journal:  Microorganisms       Date:  2022-02-18

5.  Gordonia species as a rare pathogen isolated from milk of dairy cows with mastitis.

Authors:  Jaroslav Bzdil; Sona Slosarkova; Petr Fleischer; Jan Matiasovic
Journal:  Sci Rep       Date:  2022-04-11       Impact factor: 4.379

6.  VpStyA1/VpStyA2B of Variovorax paradoxus EPS: An Aryl Alkyl Sulfoxidase Rather than a Styrene Epoxidizing Monooxygenase.

Authors:  Dirk Tischler; Ringo Schwabe; Lucas Siegel; Kristin Joffroy; Stefan R Kaschabek; Anika Scholtissek; Thomas Heine
Journal:  Molecules       Date:  2018-04-02       Impact factor: 4.411

Review 7.  Two-Component FAD-Dependent Monooxygenases: Current Knowledge and Biotechnological Opportunities.

Authors:  Thomas Heine; Willem J H van Berkel; George Gassner; Karl-Heinz van Pée; Dirk Tischler
Journal:  Biology (Basel)       Date:  2018-08-02

8.  Draft genomes and initial characteriaztion of siderophore producing pseudomonads isolated from mine dump and mine drainage.

Authors:  Marika Hofmann; Thomas Heine; Vivian Schulz; Sarah Hofmann; Dirk Tischler
Journal:  Biotechnol Rep (Amst)       Date:  2019-11-23

9.  Biochemical Characterization of Phenylacetaldehyde Dehydrogenases from Styrene-degrading Soil Bacteria.

Authors:  Juliane Zimmerling; Michel Oelschlägel; Carolin Großmann; Matthias Voitel; Michael Schlömann; Dirk Tischler
Journal:  Appl Biochem Biotechnol       Date:  2020-10-27       Impact factor: 2.926

10.  Characterization of the Glutathione S-Transferases Involved in Styrene Degradation in Gordonia rubripertincta CWB2.

Authors:  Anna C Lienkamp; Jan Burnik; Thomas Heine; Eckhard Hofmann; Dirk Tischler
Journal:  Microbiol Spectr       Date:  2021-07-28
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