Literature DB >> 29472451

Genetic manipulation of structural color in bacterial colonies.

Villads Egede Johansen1, Laura Catón2, Raditijo Hamidjaja2, Els Oosterink3, Bodo D Wilts4,5, Torben Sølbeck Rasmussen6, Michael Mario Sherlock1, Colin J Ingham7, Silvia Vignolini8.   

Abstract

Naturally occurring photonic structures are responsible for the bright and vivid coloration in a large variety of living organisms. Despite efforts to understand their biological functions, development, and complex optical response, little is known of the underlying genes involved in the development of these nanostructures in any domain of life. Here, we used Flavobacterium colonies as a model system to demonstrate that genes responsible for gliding motility, cell shape, the stringent response, and tRNA modification contribute to the optical appearance of the colony. By structural and optical analysis, we obtained a detailed correlation of how genetic modifications alter structural color in bacterial colonies. Understanding of genotype and phenotype relations in this system opens the way to genetic engineering of on-demand living optical materials, for use as paints and living sensors.

Entities:  

Keywords:  Flavobacteria; disorder; genetics; self-organization; structural color

Mesh:

Substances:

Year:  2018        PMID: 29472451      PMCID: PMC5856530          DOI: 10.1073/pnas.1716214115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

Authors:  Jean-Francois Bernardet; Yasuyoshi Nakagawa; Barry Holmes
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

Review 2.  Structural colors in nature: the role of regularity and irregularity in the structure.

Authors:  Shuichi Kinoshita; Shinya Yoshioka
Journal:  Chemphyschem       Date:  2005-08-12       Impact factor: 3.102

3.  Floral iridescence, produced by diffractive optics, acts as a cue for animal pollinators.

Authors:  Heather M Whitney; Mathias Kolle; Piers Andrew; Lars Chittka; Ullrich Steiner; Beverley J Glover
Journal:  Science       Date:  2009-01-02       Impact factor: 47.728

4.  Phylogenetic diversity of Flavobacteria isolated from the North Sea on solid media.

Authors:  Richard L Hahnke; Jens Harder
Journal:  Syst Appl Microbiol       Date:  2013-08-16       Impact factor: 4.022

5.  A fourier tool for the analysis of coherent light scattering by bio-optical nanostructures.

Authors:  Richard O Prum; Rodolfo H Torres
Journal:  Integr Comp Biol       Date:  2003-08       Impact factor: 3.326

6.  Thermal physiology. Keeping cool: Enhanced optical reflection and radiative heat dissipation in Saharan silver ants.

Authors:  Norman Nan Shi; Cheng-Chia Tsai; Fernando Camino; Gary D Bernard; Nanfang Yu; Rüdiger Wehner
Journal:  Science       Date:  2015-06-18       Impact factor: 47.728

Review 7.  The biology of color.

Authors:  Innes C Cuthill; William L Allen; Kevin Arbuckle; Barbara Caspers; George Chaplin; Mark E Hauber; Geoffrey E Hill; Nina G Jablonski; Chris D Jiggins; Almut Kelber; Johanna Mappes; Justin Marshall; Richard Merrill; Daniel Osorio; Richard Prum; Nicholas W Roberts; Alexandre Roulin; Hannah M Rowland; Thomas N Sherratt; John Skelhorn; Michael P Speed; Martin Stevens; Mary Caswell Stoddard; Devi Stuart-Fox; Laszlo Talas; Elizabeth Tibbetts; Tim Caro
Journal:  Science       Date:  2017-08-04       Impact factor: 47.728

8.  Genetics of swarming motility in Salmonella enterica serovar typhimurium: critical role for lipopolysaccharide.

Authors:  A Toguchi; M Siano; M Burkart; R M Harshey
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

9.  Flavobacterium aquidurense sp. nov. and Flavobacterium hercynium sp. nov., from a hard-water creek.

Authors:  Sylvie Cousin; Orsola Päuker; Erko Stackebrandt
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

10.  A unique self-organization of bacterial sub-communities creates iridescence in Cellulophaga lytica colony biofilms.

Authors:  Betty Kientz; Stephen Luke; Peter Vukusic; Renaud Péteri; Cyrille Beaudry; Tristan Renault; David Simon; Tâm Mignot; Eric Rosenfeld
Journal:  Sci Rep       Date:  2016-01-28       Impact factor: 4.379

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  5 in total

1.  Streamlined CRISPR genome engineering in wild-type bacteria using SIBR-Cas.

Authors:  Constantinos Patinios; Sjoerd C A Creutzburg; Adini Q Arifah; Belén Adiego-Pérez; Evans A Gyimah; Colin J Ingham; Servé W M Kengen; John van der Oost; Raymond H J Staals
Journal:  Nucleic Acids Res       Date:  2021-11-08       Impact factor: 16.971

2.  Polysaccharide metabolism regulates structural colour in bacterial colonies.

Authors:  Gea T van de Kerkhof; Lukas Schertel; Laura Catòn; Thomas G Parton; Karin H Müller; Heather F Greer; Colin J Ingham; Silvia Vignolini
Journal:  J R Soc Interface       Date:  2022-05-25       Impact factor: 4.293

Review 3.  Design Principles of the Rotary Type 9 Secretion System.

Authors:  Abhishek Trivedi; Jitendrapuri Gosai; Daisuke Nakane; Abhishek Shrivastava
Journal:  Front Microbiol       Date:  2022-05-10       Impact factor: 6.064

4.  Complex photonic response reveals three-dimensional self-organization of structural coloured bacterial colonies.

Authors:  Lukas Schertel; Gea T van de Kerkhof; Gianni Jacucci; Laura Catón; Yu Ogawa; Bodo D Wilts; Colin J Ingham; Silvia Vignolini; Villads E Johansen
Journal:  J R Soc Interface       Date:  2020-05-20       Impact factor: 4.118

5.  Draft Genome Sequence of the Iridescent Marine Bacterium Tenacibaculum discolor Strain IMLK18.

Authors:  H Lynn Kee; Irina V Mikheyeva; Rebecca L Mickol; Scott C Dawson; Dianne K Newman; Jared R Leadbetter
Journal:  Microbiol Resour Announc       Date:  2019-01-31
  5 in total

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