Literature DB >> 29471451

Genomic Evidence of Widespread Admixture from Polar Bears into Brown Bears during the Last Ice Age.

James A Cahill1, Peter D Heintzman1,2, Kelley Harris3, Matthew D Teasdale4,5, Joshua Kapp1, Andre E R Soares1, Ian Stirling6,7, Daniel Bradley4, Ceiridwen J Edwards8, Kiley Graim9,10, Aliaksandr A Kisleika11, Alexander V Malev12, Nigel Monaghan13, Richard E Green14,15, Beth Shapiro1,15.   

Abstract

Recent genomic analyses have provided substantial evidence for past periods of gene flow from polar bears (Ursus maritimus) into Alaskan brown bears (Ursus arctos), with some analyses suggesting a link between climate change and genomic introgression. However, because it has mainly been possible to sample bears from the present day, the timing, frequency, and evolutionary significance of this admixture remains unknown. Here, we analyze genomic DNA from three additional and geographically distinct brown bear populations, including two that lived temporally close to the peak of the last ice age. We find evidence of admixture in all three populations, suggesting that admixture between these species has been common in their recent evolutionary history. In addition, analyses of ten fossil bears from the now-extinct Irish population indicate that admixture peaked during the last ice age, whereas brown bear and polar bear ranges overlapped. Following this peak, the proportion of polar bear ancestry in Irish brown bears declined rapidly until their extinction. Our results support a model in which ice age climate change created geographically widespread conditions conducive to admixture between polar bears and brown bears, as is again occurring today. We postulate that this model will be informative for many admixing species pairs impacted by climate change. Our results highlight the power of paleogenomics to reveal patterns of evolutionary change that are otherwise masked in contemporary data.

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Year:  2018        PMID: 29471451     DOI: 10.1093/molbev/msy018

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  14 in total

Review 1.  Hybridization in human evolution: Insights from other organisms.

Authors:  Rebecca R Ackermann; Michael L Arnold; Marcella D Baiz; James A Cahill; Liliana Cortés-Ortiz; Ben J Evans; B Rosemary Grant; Peter R Grant; Benedikt Hallgrimsson; Robyn A Humphreys; Clifford J Jolly; Joanna Malukiewicz; Christopher J Percival; Terrence B Ritzman; Christian Roos; Charles C Roseman; Lauren Schroeder; Fred H Smith; Kerryn A Warren; Robert K Wayne; Dietmar Zinner
Journal:  Evol Anthropol       Date:  2019-06-20

2.  Fatty acid profiles of feeding and fasting bears: estimating calibration coefficients, the timeframe of diet estimates, and selective mobilization during hibernation.

Authors:  Gregory W Thiemann; Karyn D Rode; Joy A Erlenbach; Suzanne M Budge; Charles T Robbins
Journal:  J Comp Physiol B       Date:  2021-10-23       Impact factor: 2.200

3.  A polar bear paleogenome reveals extensive ancient gene flow from polar bears into brown bears.

Authors:  Ming-Shan Wang; Gemma G R Murray; Daniel Mann; Pamela Groves; Alisa O Vershinina; Megan A Supple; Joshua D Kapp; Russell Corbett-Detig; Sarah E Crump; Ian Stirling; Kristin L Laidre; Michael Kunz; Love Dalén; Richard E Green; Beth Shapiro
Journal:  Nat Ecol Evol       Date:  2022-06-16       Impact factor: 19.100

4.  Insights into bear evolution from a Pleistocene polar bear genome.

Authors:  Tianying Lan; Kalle Leppälä; Crystal Tomlin; Sandra L Talbot; George K Sage; Sean D Farley; Richard T Shideler; Lutz Bachmann; Øystein Wiig; Victor A Albert; Jarkko Salojärvi; Thomas Mailund; Daniela I Drautz-Moses; Stephan C Schuster; Luis Herrera-Estrella; Charlotte Lindqvist
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-06       Impact factor: 12.779

5.  An Annotated Draft Genome for the Andean Bear, Tremarctos ornatus.

Authors:  Nedda F Saremi; Jonas Oppenheimer; Christopher Vollmers; Brendan O'Connell; Shard A Milne; Ashley Byrne; Li Yu; Oliver A Ryder; Richard E Green; Beth Shapiro
Journal:  J Hered       Date:  2021-07-15       Impact factor: 2.645

6.  Performance and automation of ancient DNA capture with RNA hyRAD probes.

Authors:  Tomasz Suchan; Mariya A Kusliy; Naveed Khan; Loreleï Chauvey; Laure Tonasso-Calvière; Stéphanie Schiavinato; John Southon; Marcel Keller; Keiko Kitagawa; Johannes Krause; Alexander N Bessudnov; Alexander A Bessudnov; Alexander S Graphodatsky; Silvia Valenzuela-Lamas; Jarosław Wilczyński; Sylwia Pospuła; Krzysztof Tunia; Marek Nowak; Magdalena Moskal-delHoyo; Alexey A Tishkin; Alexander J E Pryor; Alan K Outram; Ludovic Orlando
Journal:  Mol Ecol Resour       Date:  2021-10-15       Impact factor: 8.678

7.  An Ancient Baboon Genome Demonstrates Long-Term Population Continuity in Southern Africa.

Authors:  Iain Mathieson; Federico Abascal; Lasse Vinner; Pontus Skoglund; Cristina Pomilla; Peter Mitchell; Charles Arthur; Deepti Gurdasani; Eske Willerslev; Manj S Sandhu; Genevieve Dewar
Journal:  Genome Biol Evol       Date:  2020-04-01       Impact factor: 3.416

8.  Hybridization Between Yuccas From Baja California: Genomic and Environmental Patterns.

Authors:  Maria Clara Arteaga; Rafael Bello-Bedoy; Jaime Gasca-Pineda
Journal:  Front Plant Sci       Date:  2020-05-28       Impact factor: 5.753

Review 9.  Harmonizing hybridization dissonance in conservation.

Authors:  Juan I Montoya-Burgos; Mathias Currat; Claudio S Quilodrán
Journal:  Commun Biol       Date:  2020-07-21

10.  Analyses of key genes involved in Arctic adaptation in polar bears suggest selection on both standing variation and de novo mutations played an important role.

Authors:  Jose Alfredo Samaniego Castruita; Michael V Westbury; Eline D Lorenzen
Journal:  BMC Genomics       Date:  2020-08-06       Impact factor: 3.969

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