Literature DB >> 29453082

Potential roles for transposable elements in creating imprinted expression.

Sarah N Anderson1, Nathan M Springer2.   

Abstract

Changes in gene expression can have profound effects on phenotype. Nature has provided many complex patterns of gene regulation such as imprinting. Imprinted genes exhibit differences in the expression of the maternal and paternal alleles, even though they reside in the same nucleus with access to the same trans-acting factors. Significant attention has been focused on the potential reasons that imprinted expression could be beneficial and stabilized by selection. However, less attention has focused on understanding how imprinted expression might arise or decay. We discuss the evidence for frequent turnover of imprinted expression based on evolutionary analyses in plants and the potential role for transposable elements (TEs) in creating imprinted expression patterns.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29453082     DOI: 10.1016/j.gde.2018.01.008

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  6 in total

1.  Neofunctionalization of a Noncoding Portion of a DNA Transposon in the Coding Region of the Chimerical Sex-Determining Gene dm-W in Xenopus Frogs.

Authors:  Shun Hayashi; Kosuke Suda; Fuga Fujimura; Makoto Fujikawa; Kei Tamura; Daisuke Tsukamoto; Ben J Evans; Nobuhiko Takamatsu; Michihiko Ito
Journal:  Mol Biol Evol       Date:  2022-07-02       Impact factor: 8.800

2.  The epigenetic regulation of HsMar1, a human DNA transposon.

Authors:  Sylvaine Renault; Murielle Genty; Alison Gabori; Catherine Boisneau; Charles Esnault; Thomas Dugé de Bernonville; Corinne Augé-Gouillou
Journal:  BMC Genet       Date:  2019-02-14       Impact factor: 2.797

3.  Genomic impact of stress-induced transposable element mobility in Arabidopsis.

Authors:  David Roquis; Marta Robertson; Liang Yu; Michael Thieme; Magdalena Julkowska; Etienne Bucher
Journal:  Nucleic Acids Res       Date:  2021-10-11       Impact factor: 16.971

4.  The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm.

Authors:  Jonathan I Gent; Kaitlin M Higgins; Kyle W Swentowsky; Fang-Fang Fu; Yibing Zeng; Dong Won Kim; R Kelly Dawe; Nathan M Springer; Sarah N Anderson
Journal:  Plant Cell       Date:  2022-09-27       Impact factor: 12.085

5.  Identification of Imprinted Genes Based on Homology: An Example of Fragaria vesca.

Authors:  Yaping Liu; Xiaotong Jing; Hong Zhang; Jinsong Xiong; Yushan Qiao
Journal:  Genes (Basel)       Date:  2021-03-08       Impact factor: 4.096

6.  Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting.

Authors:  Jessica A Rodrigues; Ping-Hung Hsieh; Deling Ruan; Toshiro Nishimura; Manoj K Sharma; Rita Sharma; XinYi Ye; Nicholas D Nguyen; Sukhranjan Nijjar; Pamela C Ronald; Robert L Fischer; Daniel Zilberman
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-20       Impact factor: 11.205

  6 in total

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