Literature DB >> 29451797

Unimolecular Fragmentation of Deprotonated Diproline [Pro2-H]- Studied by Chemical Dynamics Simulations and IRMPD Spectroscopy.

Ana Martin-Somer1,2, Jonathan Martens3, Josipa Grzetic3, William L Hase4, Jos Oomens3,5, Riccardo Spezia1,6.   

Abstract

Dissociation chemistry of the diproline anion [Pro2-H]- is studied using chemical dynamics simulations coupled with quantum-chemical calculations and RRKM analysis. Pro2- is chosen due to its reduced size and the small number of sites where deprotonation can take place. The mechanisms leading to the two dominant collision-induced dissociation (CID) product ions are elucidated. Trajectories from a variety of isomers of [Pro2-H]- were followed in order to sample a larger range of possible reactivity. While different mechanisms yielding y1- product ions are proposed, there is only one mechanism yielding the b2- ion. This mechanism leads to formation of a b2- fragment with a diketopiperazine structure. The sole formation of a diketopiperazine b2 sequence ion is experimentally confirmed by infrared ion spectroscopy of the fragment anion. Furthermore, collisional and internal energy activation simulations are used in parallel to identify the different dynamical aspects of the observed reactivity.

Entities:  

Year:  2018        PMID: 29451797     DOI: 10.1021/acs.jpca.7b11873

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  2 in total

1.  Fragmentation Spectra Prediction and DNA Adducts Structural Determination.

Authors:  Andrea Carrà; Veronica Macaluso; Peter W Villalta; Riccardo Spezia; Silvia Balbo
Journal:  J Am Soc Mass Spectrom       Date:  2019-11-06       Impact factor: 3.109

Review 2.  A Trajectory-Based Method to Explore Reaction Mechanisms.

Authors:  Saulo A Vázquez; Xose L Otero; Emilio Martinez-Nunez
Journal:  Molecules       Date:  2018-11-30       Impact factor: 4.411

  2 in total

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