| Literature DB >> 29451157 |
Xue Li1, Qing-Feng Liang2, Guan-Yu Su2, Li-Yuan Wu1, Xin-Xin Lu1, Ning-Li Wang2.
Abstract
Entities:
Mesh:
Year: 2018 PMID: 29451157 PMCID: PMC5830837 DOI: 10.4103/0366-6999.225063
Source DB: PubMed Journal: Chin Med J (Engl) ISSN: 0366-6999 Impact factor: 2.628
Taxonomy of Chlamydia spp., the associated diseases, typing methods and epidemiology
| Pathogen | Host | Serotyping method designation | Target loci | Discrimination type | |
|---|---|---|---|---|---|
| Human | MOMP serotyping | Immunoreactivity | |||
| ELISA | Immunoreactivity | ||||
| MLST | 7 house keeping genes | SNPs | |||
| Real-time PCR | SNPs + indels | ||||
| PCR-sequencing | SNPs | ||||
| PCR-RFLP | DNA restriction patterns | ||||
| PFGE | Genomic DNA | SNPs | |||
| Whole-genome sequencing | Genome | All polymorphisms | |||
| Animal and human | Do not need serotyping | ||||
| Animal-to-human transmission | Do not need serotyping | ||||
| Trachoma | Australia | 15.4–43.9% | Children | Ba/C | |
| Iran | 5.9–10.8% | Children | B/C | ||
| Niger | 10.0% | Children | Ba | ||
| India | 35.0% | >15 years old | B/C | ||
| Gambia | 6.7% | Children | Ba | ||
| Tanzania | 32.3% | Children | A | ||
| Ethiopia | 35.6% | Children | Ba | ||
| Brazil | 4.7% | Children | A | ||
| China | <5.0% | Children | B | ||
| Genital tract chlamydia infection | China | 2.1% (men)/2.6% (women) | Adults | E, F, G, D | |
| LEV | Netherlands | 0.9% | Men who have sex with men | L1–L3 | |
| UK | 0.9% | ||||
| Pneumonia | 7.2% | Infants | E, F, J, D, K, G, H | ||
| Pneumonia | German | 1.4% | Adults | ||
| Brazil | 5.2% | Children | |||
| United States | 8.0% | Adults | |||
| Canada | 8.0% | Adults | |||
| China | 3.5% | Children | |||
| Asthma, arthritis, cerebrovascular disease, atherosclerosis | Seldom research | ||||
| Pneumonia | Worldwide | 1.0% | |||
| Pneumonia | Seldom research | ||||
| Abortion, stillbirth, septicemia | Seldom research | ||||
SNPs: Single-nucleotide polymorphisms; PCR: Polymerase chain reaction; RFLP: Restriction fragment length polymorphism; MOMP: Major outer membrane protein; MLST: Multilocus sequence typing; PFGE: Pulsed-field gel electrophoresis; LGV: Lymphogranuloma venereum.