| Literature DB >> 29449884 |
Hui Li1,2, Yanmei Liu2, Yuting Wang2, Meirong Chen1, Xiaoshan Zhuang2, Chaogang Wang1,2, Jiangxin Wang1,2, Zhangli Hu1,2.
Abstract
BACKGROUND: Sulfur-deprived cultivation of Chlamydomonas reinhardtii, referred as "two-stage culture" transferring the cells from regular algal medium to sulfur-deplete one, has been extensively studied to improve photobio-H2 production in this green microalga. During sulfur-deprivation treatment, the synthesis of a key component of photosystem II complex, D1 protein, was inhibited and improved photobio-H2 production could be established in C. reinhardtii. However, separation of algal cells from a regular liquid culture medium to a sulfur-deprived one is not only a discontinuous process, but also a cost- and time-consuming operation. More applicable and economic alternatives for sustained H2 production by C. reinhardtii are still highly required.Entities:
Keywords: Biohydrogen; Chlamydomonas reinhardtii; Microalga; Non-coding RNA; Photosystem II
Year: 2018 PMID: 29449884 PMCID: PMC5808451 DOI: 10.1186/s13068-018-1030-2
Source DB: PubMed Journal: Biotechnol Biofuels ISSN: 1754-6834 Impact factor: 6.040
Fig. 1Partial scheme of expression vector pH124-amiRNA-D1
Fig. 2Construction of amiRNA-targeting psbA gene. a Selection criteria of WMD3 designing amiRNA. b Position of amiRNA-D1 target region in psbA gene. Solid green boxes represent psbA exons. Open boxes represent psbA introns. Short lines under the gene sketch show the designed amiRNAs, and the green line is the chosen amiRNA-D1. Target sequence of psbA is shown in black, and the mature miRNA sequence is shown in green. c Relative H2-producing level detected by gas chromatography (GC) indicates the first screen of Chlamydomonas transformants containing two best scored amiRNA candidates. d Loop–stem structure of miRNA1162 precursor and amiRNA-D1. The mature parts (miRNA/miRNA* duplex) are shown in the box. The mature miRNA sequence is shown in green and the miRNA* sequence is shown in red
Fig. 3Verification of transformant using PCR and RT-PCR. a The PCR amplification results of amiRNA-D1 fragment in transgenic algal strain and in WT. b RT-PCR amplification results of amiRNA in transgenic algal strain and in WT. Lanes 1, 2: transgenic algal strain; lane 3: WT CC-849; M molecular marker. All the positive bands were purified and verified by sequencing. Full-length gels are presented in Additional file 1: Figure S1
Fig. 4Growth curve (a) and chlorophyll content (b) of WT and transgenic algae. Data were the average of three replicates independently
Fig. 5Quantitative analyses of amiRNA and its target gene at mRNA levels. Expression of amiRNA-D1 in transgenic alga (a) and psbA in WT and transgenic alga (b) before and after heat shock. CN control, HS heat shock. **p < 0.01
Comparison of the total H2 yield (μL) in the WT strain (CC-849) and the transgenic algae (amiRNA-D1) after the heat induction
| Strain | Day | ||||||
|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | |
| WT (CC-849) | 0 | 149.34 ± 4.38 | 214.08 ± 5.42 | 244.83 ± 25.51 | 295.35 ± 25.38 | 341.19 ± 12.69 | 381.99 ± 16.02 |
| Transgenic (amiRNA-D1) | 0 | 183.50 ± 5.20 | 240.71 ± 8.27 | 363.89 ± 11.21 | 426.37 ± 15.76 | 463.19 ± 29.28 | 600.25 ± 77.15 |
Fig. 6H2 production (a) and O2 content (b) of WT and transgenic alga after heat induction
Primers used for amiRNA-D1 and psbA gene expression detections by qRT-PCR
| Name | Primer | Sequence (5′ → 3′) |
|---|---|---|
| D1-F | Forward primer | CGGTAATCGGTATTTGGT |
| D2-R | Reverse primer | GCACGGTTGATGATGTCT |
| Actin-F | Forward primer | ACCCCGTGCTGCTGACTG |
| Actin-R | Reverse primer | ACGTTGAAGGTCTCGAACA |
| amiRNA-D1 quantification | ||
| miRNA-D1-F | Forward primer | TGTCGGTATGTTGCAGTAAGA |
| RT-amiRNA-D1 | Primer for reverse-transcription | GTGCAGGGTCCGAGGTCAGAGCCACCTGGGCAATTTTTTTTTTTCTGTCT |
| U4-F | Forward primer | CGGCGCAAAAGGCCCGACAGAAAT |
| RT-U4 | Primer for reverse-transcription | GTGCAGGGTCCGAGGTCAGAGCCACCTGGGCAATTTTTTTTTTTATTTCTC |
| Universal R | Universal reverse primer | CAGTGCAGGGTCCGAGGT |