Literature DB >> 29448982

Stochastic Gating as a Novel Mechanism for Channel Selectivity.

Alexander M Berezhkovskii1, Sergey M Bezrukov2.   

Abstract

An ideal channel, responsible for metabolite fluxes in and out of the cells and cellular compartments, is supposed to be selective for a particular set of molecules only. However, such a channel has to be wide enough to accommodate relatively large metabolites, and, therefore, it allows passage of smaller solutes, for example, sodium, potassium, and chloride ions, thus compromising membrane's barrier function. Here we show that stochastic gating is able to provide a mechanism for the selectivity of wide channels in favor of large metabolites. Specifically, applying our recent theory of the stochastic gating effect on channel-facilitated transport, we demonstrate that under certain conditions gating hinders translocation of fast-diffusing small solutes to a significantly higher degree than that of large solutes that diffuse much slower. We hypothesize that this can be used by Nature to minimize the shunting effect of wide channels with respect to small solutes. Published by Elsevier Inc.

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Year:  2018        PMID: 29448982      PMCID: PMC5883569          DOI: 10.1016/j.bpj.2018.01.007

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  17 in total

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Review 9.  VDAC structure, selectivity, and dynamics.

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Journal:  Biochim Biophys Acta       Date:  2012-01-03

10.  The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating.

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  2 in total

1.  Effect of stochastic gating on the flux through a membrane channel: a steady-state approach.

Authors:  Alexander M Berezhkovskii; Sergey M Bezrukov
Journal:  J Phys Condens Matter       Date:  2018-05-18       Impact factor: 2.333

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  2 in total

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