Literature DB >> 29447350

Soil protists: a fertile frontier in soil biology research.

Stefan Geisen1,2, Edward A D Mitchell3,4, Sina Adl5, Michael Bonkowski6, Micah Dunthorn7, Flemming Ekelund8, Leonardo D Fernández9, Alexandre Jousset10, Valentyna Krashevska11, David Singer3, Frederick W Spiegel12, Julia Walochnik13, Enrique Lara3,14.   

Abstract

Protists include all eukaryotes except plants, fungi and animals. They are an essential, yet often forgotten, component of the soil microbiome. Method developments have now furthered our understanding of the real taxonomic and functional diversity of soil protists. They occupy key roles in microbial foodwebs as consumers of bacteria, fungi and other small eukaryotes. As parasites of plants, animals and even of larger protists, they regulate populations and shape communities. Pathogenic forms play a major role in public health issues as human parasites, or act as agricultural pests. Predatory soil protists release nutrients enhancing plant growth. Soil protists are of key importance for our understanding of eukaryotic evolution and microbial biogeography. Soil protists are also useful in applied research as bioindicators of soil quality, as models in ecotoxicology and as potential biofertilizers and biocontrol agents. In this review, we provide an overview of the enormous morphological, taxonomical and functional diversity of soil protists, and discuss current challenges and opportunities in soil protistology. Research in soil biology would clearly benefit from incorporating more protistology alongside the study of bacteria, fungi and animals.

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Year:  2018        PMID: 29447350     DOI: 10.1093/femsre/fuy006

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  41 in total

Review 1.  Taxi drivers: the role of animals in transporting mycorrhizal fungi.

Authors:  Martina Vašutová; Piotr Mleczko; Alvaro López-García; Irena Maček; Gergely Boros; Jan Ševčík; Saori Fujii; Davorka Hackenberger; Ivan H Tuf; Elisabeth Hornung; Barna Páll-Gergely; Rasmus Kjøller
Journal:  Mycorrhiza       Date:  2019-07-10       Impact factor: 3.387

Review 2.  The Ecology and Evolution of Amoeba-Bacterium Interactions.

Authors:  Yijing Shi; David C Queller; Yuehui Tian; Siyi Zhang; Qingyun Yan; Zhili He; Zhenzhen He; Chenyuan Wu; Cheng Wang; Longfei Shu
Journal:  Appl Environ Microbiol       Date:  2021-01-04       Impact factor: 4.792

3.  Effects of Plants on Metacommunities and Correlation Networks of Soil Microbial Groups in an Ecologically Restored Wetland.

Authors:  So-Yeon Jeong; Tae Gwan Kim
Journal:  Microb Ecol       Date:  2020-10-23       Impact factor: 4.552

4.  Soil Testate Amoebae and Diatoms as Bioindicators of an Old Heavy Metal Contaminated Floodplain in Japan.

Authors:  Manfred Wanner; Klaus Birkhofer; Thomas Fischer; Miki Shimizu; Satoshi Shimano; Daniel Puppe
Journal:  Microb Ecol       Date:  2019-05-12       Impact factor: 4.552

Review 5.  A Comprehensive Insight of Current and Future Challenges in Large-Scale Soil Microbiome Analyses.

Authors:  Jean Legeay; Mohamed Hijri
Journal:  Microb Ecol       Date:  2022-06-23       Impact factor: 4.552

6.  Application of young maize plant residues alters the microbiome composition and its functioning in a soil under conservation agriculture: a metagenomics study.

Authors:  Mario Hernández-Guzmán; Valentín Pérez-Hernández; Selene Gómez-Acata; Norma Jiménez-Bueno; Nele Verhulst; Ligia Catalina Muñoz-Arenas; Yendi E Navarro-Noya; Marco L Luna-Guido; Luc Dendooven
Journal:  Arch Microbiol       Date:  2022-07-05       Impact factor: 2.552

7.  Ecological clusters of soil taxa within bipartite networks are highly sensitive to climatic conditions in global drylands.

Authors:  David S Pescador; Manuel Delgado-Baquerizo; Anna Maria Fiore-Donno; Brajesh K Singh; Michael Bonkowski; Fernando T Maestre
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-06-27       Impact factor: 6.671

8.  Soil microbial legacies differ following drying-rewetting and freezing-thawing cycles.

Authors:  Annelein Meisner; Basten L Snoek; Joseph Nesme; Elizabeth Dent; Samuel Jacquiod; Aimée T Classen; Anders Priemé
Journal:  ISME J       Date:  2021-01-06       Impact factor: 10.302

9.  Niche Conservatism Drives the Elevational Diversity Gradient in Major Groups of Free-Living Soil Unicellular Eukaryotes.

Authors:  Leonardo D Fernández; Christophe V W Seppey; David Singer; Bertrand Fournier; Dylan Tatti; Edward A D Mitchell; Enrique Lara
Journal:  Microb Ecol       Date:  2021-05-30       Impact factor: 4.552

10.  Distinct Resistomes and Microbial Communities of Soils, Wastewater Treatment Plants and Households Suggest Development of Antibiotic Resistances Due to Distinct Environmental Conditions in Each Environment.

Authors:  Laura Schages; Florian Wichern; Stefan Geisen; Rainer Kalscheuer; Dirk Bockmühl
Journal:  Antibiotics (Basel)       Date:  2021-05-01
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