Literature DB >> 29446766

Are whole-exome and whole-genome sequencing approaches cost-effective? A systematic review of the literature.

Katharina Schwarze1, James Buchanan1, Jenny C Taylor2,3, Sarah Wordsworth4,5.   

Abstract

PURPOSE: We conducted a systematic literature review to summarize the current health economic evidence for whole-exome sequencing (WES) and whole-genome sequencing (WGS).
METHODS: Relevant studies were identified in the EMBASE, MEDLINE, Cochrane Library, EconLit and University of York Centre for Reviews and Dissemination databases from January 2005 to July 2016. Publications were included in the review if they were economic evaluations, cost studies, or outcome studies.
RESULTS: Thirty-six studies met our inclusion criteria. These publications investigated the use of WES and WGS in a variety of genetic conditions in clinical practice, the most common being neurological or neurodevelopmental disorders. Study sample size varied from a single child to 2,000 patients. Cost estimates for a single test ranged from $555 to $5,169 for WES and from $1,906 to $24,810 for WGS. Few cost analyses presented data transparently and many publications did not state which components were included in cost estimates.
CONCLUSION: The current health economic evidence base to support the more widespread use of WES and WGS in clinical practice is very limited. Studies that carefully evaluate the costs, effectiveness, and cost-effectiveness of these tests are urgently needed to support their translation into clinical practice.

Entities:  

Mesh:

Year:  2018        PMID: 29446766     DOI: 10.1038/gim.2017.247

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  112 in total

1.  Value of genetic analysis for confirming inborn errors of metabolism detected through the Spanish neonatal screening program.

Authors:  Rosa Navarrete; Fátima Leal; Ana I Vega; Ana Morais-López; María Teresa Garcia-Silva; Elena Martín-Hernández; Pilar Quijada-Fraile; Ana Bergua; Inmaculada Vives; Inmaculada García-Jiménez; Raquel Yahyaoui; Consuelo Pedrón-Giner; Amaya Belanger-Quintana; Sinziana Stanescu; Elvira Cañedo; Oscar García-Campos; María Bueno-Delgado; Carmen Delgado-Pecellín; Isidro Vitoria; María Dolores Rausell; Elena Balmaseda; Mari Luz Couce; Lourdes R Desviat; Begoña Merinero; Pilar Rodríguez-Pombo; Magdalena Ugarte; Celia Pérez-Cerdá; Belén Pérez
Journal:  Eur J Hum Genet       Date:  2019-01-09       Impact factor: 4.246

2.  Whole-exome sequencing in intellectual disability; cost before and after a diagnosis.

Authors:  Terry Vrijenhoek; Eline M Middelburg; Glen R Monroe; Koen L I van Gassen; Joost W Geenen; Anke M Hövels; Nine V Knoers; Hans Kristian Ploos van Amstel; Gerardus W J Frederix
Journal:  Eur J Hum Genet       Date:  2018-06-29       Impact factor: 4.246

3.  Economic evaluation of genomic sequencing in the paediatric population: a critical review.

Authors:  Khurshid Alam; Deborah Schofield
Journal:  Eur J Hum Genet       Date:  2018-05-24       Impact factor: 4.246

4.  Arrhythmogenic cardiomyopathy: in search of unifying genetic theory.

Authors:  Jacob A Hoffman; Rishi Arora
Journal:  Cardiovasc Res       Date:  2019-03-15       Impact factor: 10.787

Review 5.  Omics Studies in Hemoglobinopathies.

Authors:  Eleni Katsantoni
Journal:  Mol Diagn Ther       Date:  2019-04       Impact factor: 4.074

6.  Statistical Binning for Barcoded Reads Improves Downstream Analyses.

Authors:  Ariya Shajii; Ibrahim Numanagić; Christopher Whelan; Bonnie Berger
Journal:  Cell Syst       Date:  2018-08-22       Impact factor: 10.304

7.  The Clinical Genome and Ancestry Report: An interactive web application for prioritizing clinically implicated variants from genome sequencing data with ancestry composition.

Authors:  In-Hee Lee; Jose A Negron; Carles Hernandez-Ferrer; William Jefferson Alvarez; Kenneth D Mandl; Sek Won Kong
Journal:  Hum Mutat       Date:  2019-11-15       Impact factor: 4.878

Review 8.  Genetic testing for kidney disease of unknown etiology.

Authors:  Thomas Hays; Emily E Groopman; Ali G Gharavi
Journal:  Kidney Int       Date:  2020-04-24       Impact factor: 10.612

9.  Rapid Challenges: Ethics and Genomic Neonatal Intensive Care.

Authors:  Christopher Gyngell; Ainsley J Newson; Dominic Wilkinson; Zornitza Stark; Julian Savulescu
Journal:  Pediatrics       Date:  2019-01       Impact factor: 7.124

10.  A population-based cost-effectiveness study of early genetic testing in severe epilepsies of infancy.

Authors:  Katherine B Howell; Stefanie Eggers; Kim Dalziel; Jessica Riseley; Simone Mandelstam; Candace T Myers; Jacinta M McMahon; Amy Schneider; Gemma L Carvill; Heather C Mefford; Ingrid E Scheffer; A Simon Harvey
Journal:  Epilepsia       Date:  2018-05-11       Impact factor: 5.864

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