Literature DB >> 29444441

Initiating Events in Direct Cardiomyocyte Reprogramming.

Kimberly Sauls1, Todd M Greco2, Li Wang3, Meng Zou1, Michelle Villasmil4, Li Qian3, Ileana M Cristea2, Frank L Conlon5.   

Abstract

Direct reprogramming of fibroblasts into cardiomyocyte-like cells (iCM) holds great potential for heart regeneration and disease modeling and may lead to future therapeutic applications. Currently, application of this technology is limited by our lack of understanding of the molecular mechanisms that drive direct iCM reprogramming. Using a quantitative mass spectrometry-based proteomic approach, we identified the temporal global changes in protein abundance that occur during initial phases of iCM reprogramming. Collectively, our results show systematic and temporally distinct alterations in levels of specific functional classes of proteins during the initiating steps of reprogramming including extracellular matrix proteins, translation factors, and chromatin-binding proteins. We have constructed protein relational networks associated with the initial transition of a fibroblast into an iCM. These findings demonstrate the presence of an orchestrated series of temporal steps associated with dynamic changes in protein abundance in a defined group of protein pathways during the initiating events of direct reprogramming.
Copyright © 2018 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cardiac; direct reprogramming; heart; iCM; induced cardiomyocytes; quantitative mass spectrometry

Mesh:

Substances:

Year:  2018        PMID: 29444441      PMCID: PMC6045814          DOI: 10.1016/j.celrep.2018.01.047

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  48 in total

1.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Authors:  Paul Shannon; Andrew Markiel; Owen Ozier; Nitin S Baliga; Jonathan T Wang; Daniel Ramage; Nada Amin; Benno Schwikowski; Trey Ideker
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

Review 2.  Cellular and molecular events controlling skeletal muscle mass in response to altered use.

Authors:  François B Favier; Henri Benoit; Damien Freyssenet
Journal:  Pflugers Arch       Date:  2008-01-12       Impact factor: 3.657

3.  Reprogramming of mouse fibroblasts into cardiomyocyte-like cells in vitro.

Authors:  Li Qian; Emily C Berry; Ji-dong Fu; Masaki Ieda; Deepak Srivastava
Journal:  Nat Protoc       Date:  2013-05-30       Impact factor: 13.491

4.  Beta1 integrins participate in the hypertrophic response of rat ventricular myocytes.

Authors:  R S Ross; C Pham; S Y Shai; J I Goldhaber; C Fenczik; C C Glembotski; M H Ginsberg; J C Loftus
Journal:  Circ Res       Date:  1998-06-15       Impact factor: 17.367

5.  Outside-in signalling of fibronectin stimulates cardiomyocyte hypertrophy in cultured neonatal rat ventricular myocytes.

Authors:  E Ogawa; Y Saito; M Harada; S Kamitani; K Kuwahara; Y Miyamoto; M Ishikawa; I Hamanaka; N Kajiyama; N Takahashi; O Nakagawa; I Masuda; I Kishimoto; K Nakao
Journal:  J Mol Cell Cardiol       Date:  2000-05       Impact factor: 5.000

6.  Induction of cardiomyocyte-like cells in infarct hearts by gene transfer of Gata4, Mef2c, and Tbx5.

Authors:  Kohei Inagawa; Kazutaka Miyamoto; Hiroyuki Yamakawa; Naoto Muraoka; Taketaro Sadahiro; Tomohiko Umei; Rie Wada; Yoshinori Katsumata; Ruri Kaneda; Koji Nakade; Chitose Kurihara; Yuichi Obata; Koichi Miyake; Keiichi Fukuda; Masaki Ieda
Journal:  Circ Res       Date:  2012-08-28       Impact factor: 17.367

7.  Determining the Composition and Stability of Protein Complexes Using an Integrated Label-Free and Stable Isotope Labeling Strategy.

Authors:  Todd M Greco; Amanda J Guise; Ileana M Cristea
Journal:  Methods Mol Biol       Date:  2016

8.  Re-patterning of H3K27me3, H3K4me3 and DNA methylation during fibroblast conversion into induced cardiomyocytes.

Authors:  Ziqing Liu; Olivia Chen; Michael Zheng; Li Wang; Yang Zhou; Chaoying Yin; Jiandong Liu; Li Qian
Journal:  Stem Cell Res       Date:  2016-02-27       Impact factor: 2.020

9.  High-efficiency reprogramming of fibroblasts into cardiomyocytes requires suppression of pro-fibrotic signalling.

Authors:  Yuanbiao Zhao; Pilar Londono; Yingqiong Cao; Emily J Sharpe; Catherine Proenza; Rebecca O'Rourke; Kenneth L Jones; Mark Y Jeong; Lori A Walker; Peter M Buttrick; Timothy A McKinsey; Kunhua Song
Journal:  Nat Commun       Date:  2015-09-10       Impact factor: 14.919

10.  ProteomeXchange provides globally coordinated proteomics data submission and dissemination.

Authors:  Juan A Vizcaíno; Eric W Deutsch; Rui Wang; Attila Csordas; Florian Reisinger; Daniel Ríos; José A Dianes; Zhi Sun; Terry Farrah; Nuno Bandeira; Pierre-Alain Binz; Ioannis Xenarios; Martin Eisenacher; Gerhard Mayer; Laurent Gatto; Alex Campos; Robert J Chalkley; Hans-Joachim Kraus; Juan Pablo Albar; Salvador Martinez-Bartolomé; Rolf Apweiler; Gilbert S Omenn; Lennart Martens; Andrew R Jones; Henning Hermjakob
Journal:  Nat Biotechnol       Date:  2014-03       Impact factor: 54.908

View more
  8 in total

1.  Context-Specific Transcription Factor Functions Regulate Epigenomic and Transcriptional Dynamics during Cardiac Reprogramming.

Authors:  Nicole R Stone; Casey A Gifford; Reuben Thomas; Karishma J B Pratt; Kaitlen Samse-Knapp; Tamer M A Mohamed; Ethan M Radzinsky; Amelia Schricker; Lin Ye; Pengzhi Yu; Joke G van Bemmel; Kathryn N Ivey; Katherine S Pollard; Deepak Srivastava
Journal:  Cell Stem Cell       Date:  2019-07-03       Impact factor: 24.633

Review 2.  Direct cardiac reprogramming comes of age: Recent advance and remaining challenges.

Authors:  Yifang Xie; Jiandong Liu; Li Qian
Journal:  Semin Cell Dev Biol       Date:  2021-07-23       Impact factor: 7.727

3.  Cardiac Tissue-like 3D Microenvironment Enhances Route towards Human Fibroblast Direct Reprogramming into Induced Cardiomyocytes by microRNAs.

Authors:  Camilla Paoletti; Elena Marcello; Maria Luna Melis; Carla Divieto; Daria Nurzynska; Valeria Chiono
Journal:  Cells       Date:  2022-02-25       Impact factor: 6.600

Review 4.  Direct Cardiac Reprogramming: A Novel Approach for Heart Regeneration.

Authors:  Hidenori Tani; Taketaro Sadahiro; Masaki Ieda
Journal:  Int J Mol Sci       Date:  2018-09-05       Impact factor: 5.923

5.  Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription.

Authors:  Sarah Gilbertson; Joel D Federspiel; Ella Hartenian; Ileana M Cristea; Britt Glaunsinger
Journal:  Elife       Date:  2018-10-03       Impact factor: 8.140

Review 6.  Transdifferentiation: do transition states lie on the path of development?

Authors:  Anna Reid; Baris Tursun
Journal:  Curr Opin Syst Biol       Date:  2018-10

7.  Conservation and divergence of protein pathways in the vertebrate heart.

Authors:  Joel D Federspiel; Panna Tandon; Caralynn M Wilczewski; Lauren Wasson; Laura E Herring; Samvida S Venkatesh; Ileana M Cristea; Frank L Conlon
Journal:  PLoS Biol       Date:  2019-09-06       Impact factor: 8.029

Review 8.  Direct cell-fate conversion of somatic cells: Toward regenerative medicine and industries.

Authors:  Kenichi Horisawa; Atsushi Suzuki
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2020       Impact factor: 3.493

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.