Literature DB >> 29440491

Cryo-EM structure of the bacterial actin AlfA reveals unique assembly and ATP-binding interactions and the absence of a conserved subdomain.

Gülsima D Usluer1, Frank DiMaio1, Shun Kai Yang2, Jesse M Hansen1, Jessica K Polka3, R Dyche Mullins3, Justin M Kollman4.   

Abstract

Bacterial actins are an evolutionarily diverse family of ATP-dependent filaments built from protomers with a conserved structural fold. Actin-based segregation systems are encoded on many bacterial plasmids and function to partition plasmids into daughter cells. The bacterial actin AlfA segregates plasmids by a mechanism distinct from other partition systems, dependent on its unique dynamic properties. Here, we report the near-atomic resolution electron cryo-microscopy structure of the AlfA filament, which reveals a strikingly divergent filament architecture resulting from the loss of a subdomain conserved in all other actins and a mode of ATP binding. Its unusual assembly interfaces and nucleotide interactions provide insight into AlfA dynamics, and expand the range of evolutionary variation accessible to actin quaternary structure.

Entities:  

Keywords:  bacterial actin; cryo-EM; cytoskeleton; plasmid segregation

Mesh:

Substances:

Year:  2018        PMID: 29440491      PMCID: PMC5879662          DOI: 10.1073/pnas.1715836115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

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Journal:  J Biol Chem       Date:  2010-01-27       Impact factor: 5.157

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Authors:  Olga Draper; Meghan E Byrne; Zhuo Li; Sepehr Keyhani; Joyce Cueto Barrozo; Grant Jensen; Arash Komeili
Journal:  Mol Microbiol       Date:  2011-09-14       Impact factor: 3.501

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Journal:  Curr Microbiol       Date:  2012-03-01       Impact factor: 2.188

6.  Polymeric structures and dynamic properties of the bacterial actin AlfA.

Authors:  David Popp; Akihiro Narita; Umesh Ghoshdastider; Kayo Maeda; Yuichiro Maéda; Toshiro Oda; Tetsuro Fujisawa; Hirufumi Onishi; Kazuki Ito; Robert C Robinson
Journal:  J Mol Biol       Date:  2010-02-12       Impact factor: 5.469

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8.  Helical reconstruction in RELION.

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9.  Structures of actin-like ParM filaments show architecture of plasmid-segregating spindles.

Authors:  Tanmay A M Bharat; Garib N Murshudov; Carsten Sachse; Jan Löwe
Journal:  Nature       Date:  2015-04-27       Impact factor: 49.962

10.  Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta.

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  2 in total

1.  The complex simplicity of the bacterial cytoskeleton.

Authors:  Felipe Merino; Stefan Raunser
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-16       Impact factor: 11.205

2.  The structure of a 15-stranded actin-like filament from Clostridium botulinum.

Authors:  Fujiet Koh; Akihiro Narita; Lin Jie Lee; Kotaro Tanaka; Yong Zi Tan; Venkata P Dandey; David Popp; Robert C Robinson
Journal:  Nat Commun       Date:  2019-06-28       Impact factor: 14.919

  2 in total

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