Literature DB >> 29439565

Quasi-SMILES-Based Nano-Quantitative Structure-Activity Relationship Model to Predict the Cytotoxicity of Multiwalled Carbon Nanotubes to Human Lung Cells.

Tung Xuan Trinh1, Jang-Sik Choi2, Hyunpyo Jeon3, Hyung-Gi Byun2, Tae-Hyun Yoon1, Jongwoon Kim3.   

Abstract

Quantitative structure-activity relationship (QSAR) models for nanomaterials (nano-QSAR) were developed to predict the cytotoxicity of 20 different types of multiwalled carbon nanotubes (MWCNTs) to human lung cells by using quasi-SMILES. The optimal descriptors, recorded as quasi-SMILES, were encoded to represent the physicochemical properties and experimental conditions for the MWCNTs from 276 data records collected from previously published studies. The quasi-SMILES used to build the optimal descriptors were (i) diameter, (ii) length, (iii) surface area, (iv) in vitro toxicity assay, (v) cell line, (vi) exposure time, and (vii) dose. The model calculations were performed by using the Monte Carlo method and computed with CORAL software ( www.insilico.eu/coral ). The quasi-SMILES-based nano-QSAR model provided satisfactory statistical results ( R2 for internal validation data sets: 0.60-0.80; R2pred for external validation data sets: 0.81-0.88). The model showed potential for use in the estimation of human lung cell viability after exposure to MWCNTs with the following properties: diameter, 12-74 nm; length, 0.19-20.25 μm; surface area, 11.3-380.0 m2/g; and dose, 0-200 ppm.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29439565     DOI: 10.1021/acs.chemrestox.7b00303

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  10 in total

Review 1.  QSAR without borders.

Authors:  Eugene N Muratov; Jürgen Bajorath; Robert P Sheridan; Igor V Tetko; Dmitry Filimonov; Vladimir Poroikov; Tudor I Oprea; Igor I Baskin; Alexandre Varnek; Adrian Roitberg; Olexandr Isayev; Stefano Curtarolo; Denis Fourches; Yoram Cohen; Alan Aspuru-Guzik; David A Winkler; Dimitris Agrafiotis; Artem Cherkasov; Alexander Tropsha
Journal:  Chem Soc Rev       Date:  2020-05-01       Impact factor: 54.564

Review 2.  Natural Ergot Alkaloids in Ocular Pharmacotherapy: Known Molecules for Novel Nanoparticle-Based Delivery Systems.

Authors:  Iara Baldim; Wanderley P Oliveira; Varsha Kadian; Rekha Rao; Nitesh Yadav; Sheefali Mahant; Massimo Lucarini; Alessandra Durazzo; Raquel Da Ana; Raffaele Capasso; Selma B Souto; Antonello Santini; Eliana B Souto
Journal:  Biomolecules       Date:  2020-06-30

3.  Predicting In Vitro Neurotoxicity Induced by Nanoparticles Using Machine Learning.

Authors:  Irini Furxhi; Finbarr Murphy
Journal:  Int J Mol Sci       Date:  2020-07-25       Impact factor: 5.923

Review 4.  Practices and Trends of Machine Learning Application in Nanotoxicology.

Authors:  Irini Furxhi; Finbarr Murphy; Martin Mullins; Athanasios Arvanitis; Craig A Poland
Journal:  Nanomaterials (Basel)       Date:  2020-01-08       Impact factor: 5.076

5.  NanoTox: Development of a Parsimonious In Silico Model for Toxicity Assessment of Metal-Oxide Nanoparticles Using Physicochemical Features.

Authors:  Nilesh Anantha Subramanian; Ashok Palaniappan
Journal:  ACS Omega       Date:  2021-04-23

6.  QSAR modeling of the toxicity classification of superparamagnetic iron oxide nanoparticles (SPIONs) in stem-cell monitoring applications: an integrated study from data curation to model development.

Authors:  Marianna I Kotzabasaki; Iason Sotiropoulos; Haralambos Sarimveis
Journal:  RSC Adv       Date:  2020-02-03       Impact factor: 4.036

7.  Machine learning methods for multi-walled carbon nanotubes (MWCNT) genotoxicity prediction.

Authors:  Marianna Kotzabasaki; Iason Sotiropoulos; Costas Charitidis; Haralambos Sarimveis
Journal:  Nanoscale Adv       Date:  2021-04-12

Review 8.  QSPR/QSAR: State-of-Art, Weirdness, the Future.

Authors:  Andrey A Toropov; Alla P Toropova
Journal:  Molecules       Date:  2020-03-12       Impact factor: 4.411

Review 9.  Nano-(Q)SAR for Cytotoxicity Prediction of Engineered Nanomaterials.

Authors:  Andrey A Buglak; Anatoly V Zherdev; Boris B Dzantiev
Journal:  Molecules       Date:  2019-12-11       Impact factor: 4.411

Review 10.  Understanding Nanoparticle Toxicity to Direct a Safe-by-Design Approach in Cancer Nanomedicine.

Authors:  Jossana A Damasco; Saisree Ravi; Joy D Perez; Daniel E Hagaman; Marites P Melancon
Journal:  Nanomaterials (Basel)       Date:  2020-11-02       Impact factor: 5.076

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.