Literature DB >> 29436418

Validation of the Pockit Dengue Virus Reagent Set for Rapid Detection of Dengue Virus in Human Serum on a Field-Deployable PCR System.

Jih-Jin Tsai1,2,3,4, Li-Teh Liu5, Ping-Chang Lin6,2, Ching-Yi Tsai6,2, Pin-Hsing Chou7, Yun-Long Tsai7, Hsiao-Fen Grace Chang7, Pei-Yu Alison Lee7.   

Abstract

Dengue virus (DENV) infection, a mosquito-borne disease, is a major public health problem in tropical countries. Point-of-care DENV detection with good sensitivity and specificity enables timely early diagnosis of DENV infection, facilitating effective disease management and control, particularly in regions of low resources. The Pockit dengue virus reagent set (GeneReach Biotech), a reverse transcription insulated isothermal PCR (RT-iiPCR), is available to detect all four serotypes of DENV on the field-deployable Pockit system, which is ready for on-site applications. In this study, analytical and clinical performances of the assay were evaluated. The index assay did not react with 14 non-DENV human viruses, indicating good specificity. Compared to the U.S. CDC DENV-1-4 real-time quantitative RT-PCR (qRT-PCR) assay, testing with serial dilutions of virus-spiked human sera demonstrated that the index assay had detection endpoints that were separately comparable with the 4 serotypes. Excellent reproducibility was observed among repeat tests done by six operators at three sites. In clinical performance, 195 clinical sera collected around Kaohsiung city in 2012 and 21 DENV-4-spiked sera were tested with the RT-iiPCR and qRT-PCR assays in parallel. The 121 (11 DENV-1, 78 DENV-2, 11 DENV-3, and 21 DENV-4) qRT-PCR-positive and 95 qRT-PCR-negative samples were all positive and negative by the RT-iiPCR reagent results, respectively, demonstrating high (100%) interrater agreement (95% confidence interval [CI95%], ∼98.81% to 100%; κ = 1). With analytical and clinical performance equivalent to those of the reference qRT-PCR assay, the index PCR assay on the field-deployable system can serve as a highly sensitive and specific on-site tool for DENV detection.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  RT-PCR; dengue virus; field-deployable; on-site detection

Mesh:

Substances:

Year:  2018        PMID: 29436418      PMCID: PMC5925719          DOI: 10.1128/JCM.01865-17

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  57 in total

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Journal:  Ann Acad Med Singapore       Date:  1998-03       Impact factor: 2.473

3.  Quantitative analysis of dengue-2 virus RNA during the extrinsic incubation period in individual Aedes aegypti.

Authors:  Jason Richardson; Alvaro Molina-Cruz; Ma Isabel Salazar; William Black
Journal:  Am J Trop Med Hyg       Date:  2006-01       Impact factor: 2.345

4.  A Rapid Field-Deployable Reverse Transcription-Insulated Isothermal Polymerase Chain Reaction Assay for Sensitive and Specific Detection of Bluetongue Virus.

Authors:  A Ambagala; S Pahari; M Fisher; P-Y A Lee; J Pasick; E N Ostlund; D J Johnson; O Lung
Journal:  Transbound Emerg Dis       Date:  2015-07-19       Impact factor: 5.005

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Authors:  Udeni B R Balasuriya; Pei-Yu Alison Lee; Ashish Tiwari; Ashley Skillman; Bora Nam; Thomas M Chambers; Yun-Long Tsai; Li-Juan Ma; Pai-Chun Yang; Hsiao-Fen Grace Chang; Hwa-Tang Thomas Wang
Journal:  J Virol Methods       Date:  2014-06-30       Impact factor: 2.014

6.  Evaluation of dengue NS1 antigen detection tests with acute sera from patients infected with dengue virus in Venezuela.

Authors:  Alvaro H Ramirez; Zoila Moros; Guillermo Comach; Julio Zambrano; Lola Bravo; Belqys Pinto; Silvana Vielma; José Cardier; Ferdinando Liprandi
Journal:  Diagn Microbiol Infect Dis       Date:  2009-09-05       Impact factor: 2.803

7.  Development of TaqMan probe-based insulated isothermal PCR (iiPCR) for sensitive and specific on-site pathogen detection.

Authors:  Yun-Long Tsai; Hwa-Tang Thomas Wang; Hsiao-Fen Grace Chang; Chuan-Fu Tsai; Ching-Ko Lin; Ping-Hua Teng; Chen Su; Chien-Chung Jeng; Pei-Yu Lee
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8.  1998 dengue hemorrhagic fever epidemic in Taiwan.

Authors:  Day-Yu Chao; Ting-Hsiang Lin; Kao-Pin Hwang; Jyh-Hsiung Huang; Ching-Chuan Liu; Chwan-Chuen King
Journal:  Emerg Infect Dis       Date:  2004-03       Impact factor: 6.883

9.  The Complete Genome Phylogeny of Geographically Distinct Dengue Virus Serotype 2 Isolates (1944-2013) Supports Further Groupings within the Cosmopolitan Genotype.

Authors:  Akhtar Ali; Ijaz Ali
Journal:  PLoS One       Date:  2015-09-28       Impact factor: 3.240

10.  Rapid and sensitive detection of canine distemper virus by one-tube reverse transcription-insulated isothermal polymerase chain reaction.

Authors:  Rebecca P Wilkes; Yun-Long Tsai; Pei-Yu Lee; Fu-Chun Lee; Hsiao-Fen Grace Chang; Hwa-Tang Thomas Wang
Journal:  BMC Vet Res       Date:  2014-09-09       Impact factor: 2.741

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  12 in total

Review 1.  Dengue virus: a review on advances in detection and trends - from conventional methods to novel biosensors.

Authors:  Reza Eivazzadeh-Keihan; Paria Pashazadeh-Panahi; Tohid Mahmoudi; Karim Khanmohammadi Chenab; Behzad Baradaran; Mahmoud Hashemzaei; Fateme Radinekiyan; Ahad Mokhtarzadeh; Ali Maleki
Journal:  Mikrochim Acta       Date:  2019-05-04       Impact factor: 5.833

2.  Potential Point-of-Care Testing for Dengue Virus in the Field.

Authors:  Wei-Kung Wang; Duane J Gubler
Journal:  J Clin Microbiol       Date:  2018-04-25       Impact factor: 5.948

3.  A Direct from Blood/Plasma Reverse Transcription-Polymerase Chain Reaction for Dengue Virus Detection in Point-of-Care Settings.

Authors:  Ninad Mehta; Bastien Perrais; Kimberly Martin; Anil Kumar; Tom C Hobman; Mary Noreen Cabalfin-Chua; Manuel Emerson Donaldo; Maria Salome Siose Painaga; James Yared Gaite; Vanessa Tran; Kevin C Kain; Michael T Hawkes; Stephanie K Yanow
Journal:  Am J Trop Med Hyg       Date:  2019-06       Impact factor: 2.345

Review 4.  Prevalence of Chikungunya, Dengue and Zika viruses in blood donors: a systematic literature review and meta-analysis.

Authors:  Ángel Giménez-Richarte; Mabel Ortiz de Salazar; Cristina Arbona; María P Giménez-Richarte; Miriam Collado; Pedro L Fernández; Francisco Quiles; Carlos Clavijo; Pascual Marco; Jose-Manuel Ramos-Rincon
Journal:  Blood Transfus       Date:  2021-09-22       Impact factor: 5.752

5.  Dengue Virus and Yellow Fever Virus Detection Using Reverse Transcription-Insulated Isothermal PCR and Comparison with Real-Time RT-PCR.

Authors:  Victoria Stittleburg; Alejandra Rojas; Fátima Cardozo; Flor M Muñoz; Edwin J Asturias; Daniel Olson; Alejandra Paniaga-Avila; Janaki Abeynayake; Evan J Anderson; Jesse J Waggoner
Journal:  Am J Trop Med Hyg       Date:  2020-05-21       Impact factor: 2.345

6.  An RT-PCR panel for rapid serotyping of dengue virus serotypes 1 to 4 in human serum and mosquito on a field-deployable PCR system.

Authors:  Jih-Jin Tsai; Wei-Liang Liu; Ping-Chang Lin; Bo-Yi Huang; Ching-Yi Tsai; Pin-Hsing Chou; Fu-Chun Lee; Chia-Fong Ping; Pei-Yu Alison Lee; Li-Teh Liu; Chun-Hong Chen
Journal:  PLoS One       Date:  2019-03-25       Impact factor: 3.240

7.  A fully automated sample-to-answer PCR system for easy and sensitive detection of dengue virus in human serum and mosquitos.

Authors:  Jih-Jin Tsai; Wei-Liang Liu; Ping-Chang Lin; Bo-Yi Huang; Ching-Yi Tsai; Pei-Yu Alison Lee; Yun-Long Tsai; Pin-Hsing Chou; Simon Chung; Li-Teh Liu; Chun-Hong Chen
Journal:  PLoS One       Date:  2019-07-10       Impact factor: 3.240

8.  A review of dengue diagnostics and implications for surveillance and control.

Authors:  Nader Raafat; Stuart D Blacksell; Richard J Maude
Journal:  Trans R Soc Trop Med Hyg       Date:  2019-11-01       Impact factor: 2.184

9.  Rapid identification of melioidosis agent by an insulated isothermal PCR on a field-deployable device.

Authors:  Kek Heng Chua; E Wei Tan; Hwa Chia Chai; S D Puthucheary; Ping Chin Lee; Suat Moi Puah
Journal:  PeerJ       Date:  2020-05-27       Impact factor: 2.984

10.  Low frequency of asymptomatic dengue virus-infected donors in blood donor centers during the largest dengue outbreak in Taiwan.

Authors:  Jih-Jin Tsai; Ping-Chang Lin; Ching-Yi Tsai; Ying-Hui Wang; Li-Teh Liu
Journal:  PLoS One       Date:  2018-10-08       Impact factor: 3.240

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