Literature DB >> 29435664

Deep sequencing of WNT-activated medulloblastomas reveals secondary SHH pathway activation.

J Bryan Iorgulescu1,2, Jessica Van Ziffle1,3, Meredith Stevers1, James P Grenert1,3, Boris C Bastian1,3, Lukas Chavez4,5, Damian Stichel6,7,5, Ivo Buchhalter8,9, David Samuel10, Theodore Nicolaides11,12, Anuradha Banerjee11,12, Sabine Mueller11,12,13, Nalin Gupta12, Tarik Tihan1, Andrew W Bollen1, Paul A Northcott14, Marcel Kool4,5, Stefan Pfister4,5,15, Andrey Korshunov6,7,5, Arie Perry1,12, David A Solomon16,17.   

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Year:  2018        PMID: 29435664      PMCID: PMC6078208          DOI: 10.1007/s00401-018-1819-x

Source DB:  PubMed          Journal:  Acta Neuropathol        ISSN: 0001-6322            Impact factor:   17.088


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  9 in total

1.  Intertumoral Heterogeneity within Medulloblastoma Subgroups.

Authors:  Florence M G Cavalli; Marc Remke; Ladislav Rampasek; John Peacock; David J H Shih; Betty Luu; Livia Garzia; Jonathon Torchia; Carolina Nor; A Sorana Morrissy; Sameer Agnihotri; Yuan Yao Thompson; Claudia M Kuzan-Fischer; Hamza Farooq; Keren Isaev; Craig Daniels; Byung-Kyu Cho; Seung-Ki Kim; Kyu-Chang Wang; Ji Yeoun Lee; Wieslawa A Grajkowska; Marta Perek-Polnik; Alexandre Vasiljevic; Cecile Faure-Conter; Anne Jouvet; Caterina Giannini; Amulya A Nageswara Rao; Kay Ka Wai Li; Ho-Keung Ng; Charles G Eberhart; Ian F Pollack; Ronald L Hamilton; G Yancey Gillespie; James M Olson; Sarah Leary; William A Weiss; Boleslaw Lach; Lola B Chambless; Reid C Thompson; Michael K Cooper; Rajeev Vibhakar; Peter Hauser; Marie-Lise C van Veelen; Johan M Kros; Pim J French; Young Shin Ra; Toshihiro Kumabe; Enrique López-Aguilar; Karel Zitterbart; Jaroslav Sterba; Gaetano Finocchiaro; Maura Massimino; Erwin G Van Meir; Satoru Osuka; Tomoko Shofuda; Almos Klekner; Massimo Zollo; Jeffrey R Leonard; Joshua B Rubin; Nada Jabado; Steffen Albrecht; Jaume Mora; Timothy E Van Meter; Shin Jung; Andrew S Moore; Andrew R Hallahan; Jennifer A Chan; Daniela P C Tirapelli; Carlos G Carlotti; Maryam Fouladi; José Pimentel; Claudia C Faria; Ali G Saad; Luca Massimi; Linda M Liau; Helen Wheeler; Hideo Nakamura; Samer K Elbabaa; Mario Perezpeña-Diazconti; Fernando Chico Ponce de León; Shenandoah Robinson; Michal Zapotocky; Alvaro Lassaletta; Annie Huang; Cynthia E Hawkins; Uri Tabori; Eric Bouffet; Ute Bartels; Peter B Dirks; James T Rutka; Gary D Bader; Jüri Reimand; Anna Goldenberg; Vijay Ramaswamy; Michael D Taylor
Journal:  Cancer Cell       Date:  2017-06-12       Impact factor: 31.743

2.  Medulloblastoma comprises four distinct molecular variants.

Authors:  Paul A Northcott; Andrey Korshunov; Hendrik Witt; Thomas Hielscher; Charles G Eberhart; Stephen Mack; Eric Bouffet; Steven C Clifford; Cynthia E Hawkins; Pim French; James T Rutka; Stefan Pfister; Michael D Taylor
Journal:  J Clin Oncol       Date:  2010-09-07       Impact factor: 44.544

3.  Targeted next-generation sequencing of pediatric neuro-oncology patients improves diagnosis, identifies pathogenic germline mutations, and directs targeted therapy.

Authors:  Cassie N Kline; Nancy M Joseph; James P Grenert; Jessica van Ziffle; Eric Talevich; Courtney Onodera; Mariam Aboian; Soonmee Cha; David R Raleigh; Steve Braunstein; Joseph Torkildson; David Samuel; Michelle Bloomer; Alejandra G de Alba Campomanes; Anuradha Banerjee; Nicholas Butowski; Corey Raffel; Tarik Tihan; Andrew W Bollen; Joanna J Phillips; W Michael Korn; Iwei Yeh; Boris C Bastian; Nalin Gupta; Sabine Mueller; Arie Perry; Theodore Nicolaides; David A Solomon
Journal:  Neuro Oncol       Date:  2017-05-01       Impact factor: 12.300

4.  Subgroup-specific structural variation across 1,000 medulloblastoma genomes.

Authors:  Paul A Northcott; David J H Shih; John Peacock; Livia Garzia; A Sorana Morrissy; Thomas Zichner; Adrian M Stütz; Andrey Korshunov; Jüri Reimand; Steven E Schumacher; Rameen Beroukhim; David W Ellison; Christian R Marshall; Anath C Lionel; Stephen Mack; Adrian Dubuc; Yuan Yao; Vijay Ramaswamy; Betty Luu; Adi Rolider; Florence M G Cavalli; Xin Wang; Marc Remke; Xiaochong Wu; Readman Y B Chiu; Andy Chu; Eric Chuah; Richard D Corbett; Gemma R Hoad; Shaun D Jackman; Yisu Li; Allan Lo; Karen L Mungall; Ka Ming Nip; Jenny Q Qian; Anthony G J Raymond; Nina T Thiessen; Richard J Varhol; Inanc Birol; Richard A Moore; Andrew J Mungall; Robert Holt; Daisuke Kawauchi; Martine F Roussel; Marcel Kool; David T W Jones; Hendrick Witt; Africa Fernandez-L; Anna M Kenney; Robert J Wechsler-Reya; Peter Dirks; Tzvi Aviv; Wieslawa A Grajkowska; Marta Perek-Polnik; Christine C Haberler; Olivier Delattre; Stéphanie S Reynaud; François F Doz; Sarah S Pernet-Fattet; Byung-Kyu Cho; Seung-Ki Kim; Kyu-Chang Wang; Wolfram Scheurlen; Charles G Eberhart; Michelle Fèvre-Montange; Anne Jouvet; Ian F Pollack; Xing Fan; Karin M Muraszko; G Yancey Gillespie; Concezio Di Rocco; Luca Massimi; Erna M C Michiels; Nanne K Kloosterhof; Pim J French; Johan M Kros; James M Olson; Richard G Ellenbogen; Karel Zitterbart; Leos Kren; Reid C Thompson; Michael K Cooper; Boleslaw Lach; Roger E McLendon; Darell D Bigner; Adam Fontebasso; Steffen Albrecht; Nada Jabado; Janet C Lindsey; Simon Bailey; Nalin Gupta; William A Weiss; László Bognár; Almos Klekner; Timothy E Van Meter; Toshihiro Kumabe; Teiji Tominaga; Samer K Elbabaa; Jeffrey R Leonard; Joshua B Rubin; Linda M Liau; Erwin G Van Meir; Maryam Fouladi; Hideo Nakamura; Giuseppe Cinalli; Miklós Garami; Peter Hauser; Ali G Saad; Achille Iolascon; Shin Jung; Carlos G Carlotti; Rajeev Vibhakar; Young Shin Ra; Shenandoah Robinson; Massimo Zollo; Claudia C Faria; Jennifer A Chan; Michael L Levy; Poul H B Sorensen; Matthew Meyerson; Scott L Pomeroy; Yoon-Jae Cho; Gary D Bader; Uri Tabori; Cynthia E Hawkins; Eric Bouffet; Stephen W Scherer; James T Rutka; David Malkin; Steven C Clifford; Steven J M Jones; Jan O Korbel; Stefan M Pfister; Marco A Marra; Michael D Taylor
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

5.  Dissecting the genomic complexity underlying medulloblastoma.

Authors:  David T W Jones; Natalie Jäger; Marcel Kool; Thomas Zichner; Barbara Hutter; Marc Sultan; Yoon-Jae Cho; Trevor J Pugh; Volker Hovestadt; Adrian M Stütz; Tobias Rausch; Hans-Jörg Warnatz; Marina Ryzhova; Sebastian Bender; Dominik Sturm; Sabrina Pleier; Huriye Cin; Elke Pfaff; Laura Sieber; Andrea Wittmann; Marc Remke; Hendrik Witt; Sonja Hutter; Theophilos Tzaridis; Joachim Weischenfeldt; Benjamin Raeder; Meryem Avci; Vyacheslav Amstislavskiy; Marc Zapatka; Ursula D Weber; Qi Wang; Bärbel Lasitschka; Cynthia C Bartholomae; Manfred Schmidt; Christof von Kalle; Volker Ast; Chris Lawerenz; Jürgen Eils; Rolf Kabbe; Vladimir Benes; Peter van Sluis; Jan Koster; Richard Volckmann; David Shih; Matthew J Betts; Robert B Russell; Simona Coco; Gian Paolo Tonini; Ulrich Schüller; Volkmar Hans; Norbert Graf; Yoo-Jin Kim; Camelia Monoranu; Wolfgang Roggendorf; Andreas Unterberg; Christel Herold-Mende; Till Milde; Andreas E Kulozik; Andreas von Deimling; Olaf Witt; Eberhard Maass; Jochen Rössler; Martin Ebinger; Martin U Schuhmann; Michael C Frühwald; Martin Hasselblatt; Nada Jabado; Stefan Rutkowski; André O von Bueren; Dan Williamson; Steven C Clifford; Martin G McCabe; V Peter Collins; Stephan Wolf; Stefan Wiemann; Hans Lehrach; Benedikt Brors; Wolfram Scheurlen; Jörg Felsberg; Guido Reifenberger; Paul A Northcott; Michael D Taylor; Matthew Meyerson; Scott L Pomeroy; Marie-Laure Yaspo; Jan O Korbel; Andrey Korshunov; Roland Eils; Stefan M Pfister; Peter Lichter
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

6.  Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations.

Authors:  Trevor J Pugh; Shyamal Dilhan Weeraratne; Tenley C Archer; Daniel A Pomeranz Krummel; Daniel Auclair; James Bochicchio; Mauricio O Carneiro; Scott L Carter; Kristian Cibulskis; Rachel L Erlich; Heidi Greulich; Michael S Lawrence; Niall J Lennon; Aaron McKenna; James Meldrim; Alex H Ramos; Michael G Ross; Carsten Russ; Erica Shefler; Andrey Sivachenko; Brian Sogoloff; Petar Stojanov; Pablo Tamayo; Jill P Mesirov; Vladimir Amani; Natalia Teider; Soma Sengupta; Jessica Pierre Francois; Paul A Northcott; Michael D Taylor; Furong Yu; Gerald R Crabtree; Amanda G Kautzman; Stacey B Gabriel; Gad Getz; Natalie Jäger; David T W Jones; Peter Lichter; Stefan M Pfister; Thomas M Roberts; Matthew Meyerson; Scott L Pomeroy; Yoon-Jae Cho
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

7.  Molecular subgroups of medulloblastoma: an international meta-analysis of transcriptome, genetic aberrations, and clinical data of WNT, SHH, Group 3, and Group 4 medulloblastomas.

Authors:  Marcel Kool; Andrey Korshunov; Marc Remke; David T W Jones; Maria Schlanstein; Paul A Northcott; Yoon-Jae Cho; Jan Koster; Antoinette Schouten-van Meeteren; Dannis van Vuurden; Steven C Clifford; Torsten Pietsch; Andre O von Bueren; Stefan Rutkowski; Martin McCabe; V Peter Collins; Magnus L Bäcklund; Christine Haberler; Franck Bourdeaut; Olivier Delattre; Francois Doz; David W Ellison; Richard J Gilbertson; Scott L Pomeroy; Michael D Taylor; Peter Lichter; Stefan M Pfister
Journal:  Acta Neuropathol       Date:  2012-02-23       Impact factor: 17.088

8.  Spatial heterogeneity in medulloblastoma.

Authors:  A Sorana Morrissy; Florence M G Cavalli; Marc Remke; Vijay Ramaswamy; David J H Shih; Borja L Holgado; Hamza Farooq; Laura K Donovan; Livia Garzia; Sameer Agnihotri; Erin N Kiehna; Eloi Mercier; Chelsea Mayoh; Simon Papillon-Cavanagh; Hamid Nikbakht; Tenzin Gayden; Jonathon Torchia; Daniel Picard; Diana M Merino; Maria Vladoiu; Betty Luu; Xiaochong Wu; Craig Daniels; Stuart Horswell; Yuan Yao Thompson; Volker Hovestadt; Paul A Northcott; David T W Jones; John Peacock; Xin Wang; Stephen C Mack; Jüri Reimand; Steffen Albrecht; Adam M Fontebasso; Nina Thiessen; Yisu Li; Jacqueline E Schein; Darlene Lee; Rebecca Carlsen; Michael Mayo; Kane Tse; Angela Tam; Noreen Dhalla; Adrian Ally; Eric Chuah; Young Cheng; Patrick Plettner; Haiyan I Li; Richard D Corbett; Tina Wong; William Long; James Loukides; Pawel Buczkowicz; Cynthia E Hawkins; Uri Tabori; Brian R Rood; John S Myseros; Roger J Packer; Andrey Korshunov; Peter Lichter; Marcel Kool; Stefan M Pfister; Ulrich Schüller; Peter Dirks; Annie Huang; Eric Bouffet; James T Rutka; Gary D Bader; Charles Swanton; Yusanne Ma; Richard A Moore; Andrew J Mungall; Jacek Majewski; Steven J M Jones; Sunit Das; David Malkin; Nada Jabado; Marco A Marra; Michael D Taylor
Journal:  Nat Genet       Date:  2017-04-10       Impact factor: 38.330

9.  The whole-genome landscape of medulloblastoma subtypes.

Authors:  Paul A Northcott; Ivo Buchhalter; A Sorana Morrissy; Volker Hovestadt; Joachim Weischenfeldt; Tobias Ehrenberger; Susanne Gröbner; Maia Segura-Wang; Thomas Zichner; Vasilisa A Rudneva; Hans-Jörg Warnatz; Nikos Sidiropoulos; Aaron H Phillips; Steven Schumacher; Kortine Kleinheinz; Sebastian M Waszak; Serap Erkek; David T W Jones; Barbara C Worst; Marcel Kool; Marc Zapatka; Natalie Jäger; Lukas Chavez; Barbara Hutter; Matthias Bieg; Nagarajan Paramasivam; Michael Heinold; Zuguang Gu; Naveed Ishaque; Christina Jäger-Schmidt; Charles D Imbusch; Alke Jugold; Daniel Hübschmann; Thomas Risch; Vyacheslav Amstislavskiy; Francisco German Rodriguez Gonzalez; Ursula D Weber; Stephan Wolf; Giles W Robinson; Xin Zhou; Gang Wu; David Finkelstein; Yanling Liu; Florence M G Cavalli; Betty Luu; Vijay Ramaswamy; Xiaochong Wu; Jan Koster; Marina Ryzhova; Yoon-Jae Cho; Scott L Pomeroy; Christel Herold-Mende; Martin Schuhmann; Martin Ebinger; Linda M Liau; Jaume Mora; Roger E McLendon; Nada Jabado; Toshihiro Kumabe; Eric Chuah; Yussanne Ma; Richard A Moore; Andrew J Mungall; Karen L Mungall; Nina Thiessen; Kane Tse; Tina Wong; Steven J M Jones; Olaf Witt; Till Milde; Andreas Von Deimling; David Capper; Andrey Korshunov; Marie-Laure Yaspo; Richard Kriwacki; Amar Gajjar; Jinghui Zhang; Rameen Beroukhim; Ernest Fraenkel; Jan O Korbel; Benedikt Brors; Matthias Schlesner; Roland Eils; Marco A Marra; Stefan M Pfister; Michael D Taylor; Peter Lichter
Journal:  Nature       Date:  2017-07-19       Impact factor: 49.962

  9 in total
  12 in total

1.  WNT-Activated Medulloblastomas With Hybrid Molecular Subtypes.

Authors:  Jeffrey Helgager; Peter Pytel; Varshini Vasudevaraja; Eudocia Q Lee; Matija Snuderl; J Bryan Iorgulescu; Keith L Ligon
Journal:  JCO Precis Oncol       Date:  2020-04-14

2.  Myxoid glioneuronal tumor, PDGFRA p.K385-mutant: clinical, radiologic, and histopathologic features.

Authors:  Calixto-Hope G Lucas; Javier E Villanueva-Meyer; Nicholas Whipple; Nancy Ann Oberheim Bush; Tabitha Cooney; Susan Chang; Michael McDermott; Mitchel Berger; Elaine Cham; Peter P Sun; Angelica Putnam; Hong Zhou; Robert Bollo; Samuel Cheshier; Matthew M Poppe; Kar-Ming Fung; Sarah Sung; Chad Glenn; Xuemo Fan; Serguei Bannykh; Jethro Hu; Moise Danielpour; Rong Li; Elizabeth Alva; James Johnston; Jessica Van Ziffle; Courtney Onodera; Patrick Devine; James P Grenert; Julieann C Lee; Melike Pekmezci; Tarik Tihan; Andrew W Bollen; Arie Perry; David A Solomon
Journal:  Brain Pathol       Date:  2019-11-06       Impact factor: 6.508

3.  The epidemiology of primary and metastatic brain tumors in infancy through childhood.

Authors:  Nayan Lamba; Andrew Groves; Matthew Torre; Kee Kiat Yeo; J Bryan Iorgulescu
Journal:  J Neurooncol       Date:  2022-01-17       Impact factor: 4.130

4.  Myxoid glioneuronal tumor of the septum pellucidum and lateral ventricle is defined by a recurrent PDGFRA p.K385 mutation and DNT-like methylation profile.

Authors:  David A Solomon; Andrey Korshunov; Martin Sill; David T W Jones; Marcel Kool; Stefan M Pfister; Xuemo Fan; Serguei Bannykh; Jethro Hu; Moise Danielpour; Rong Li; James Johnston; Elaine Cham; Tabitha Cooney; Peter P Sun; Nancy Ann Oberheim Bush; Michael McDermott; Jessica Van Ziffle; Courtney Onodera; James P Grenert; Boris C Bastian; Javier E Villanueva-Meyer; Melike Pekmezci; Andrew W Bollen; Arie Perry
Journal:  Acta Neuropathol       Date:  2018-07-13       Impact factor: 17.088

5.  DNA methylation profiling is a method of choice for molecular verification of pediatric WNT-activated medulloblastomas.

Authors:  Andrey Korshunov; Felix Sahm; Olga Zheludkova; Andrey Golanov; Damian Stichel; Daniel Schrimpf; Marina Ryzhova; Alexander Potapov; Antje Habel; Jochen Meyer; Peter Lichter; David T W Jones; Andreas von Deimling; Stefan M Pfister; Marcel Kool
Journal:  Neuro Oncol       Date:  2019-02-14       Impact factor: 12.300

6.  The genetic landscape of gliomas arising after therapeutic radiation.

Authors:  Giselle Y López; Jessica Van Ziffle; Courtney Onodera; James P Grenert; Iwei Yeh; Boris C Bastian; Jennifer Clarke; Nancy Ann Oberheim Bush; Jennie Taylor; Susan Chang; Nicholas Butowski; Anuradha Banerjee; Sabine Mueller; Cassie Kline; Joseph Torkildson; David Samuel; Aleli Siongco; Corey Raffel; Nalin Gupta; Sandeep Kunwar; Praveen Mummaneni; Manish Aghi; Philip Theodosopoulos; Mitchel Berger; Joanna J Phillips; Melike Pekmezci; Tarik Tihan; Andrew W Bollen; Arie Perry; David A Solomon
Journal:  Acta Neuropathol       Date:  2018-09-08       Impact factor: 15.887

7.  A CTNNB1-altered medulloblastoma shows the immunophenotypic, DNA methylation and transcriptomic profiles of SHH-activated, and not WNT-activated, medulloblastoma.

Authors:  Jason Chiang; Daniel C Moreira; Nicholas J Pytel; Yen-Chun Liu; Patrick R Blackburn; Zonggao Shi; Maria Cardenas; David A Wheeler; Larissa V Furtado
Journal:  Neuropathol Appl Neurobiol       Date:  2022-03-30       Impact factor: 6.250

8.  Oligodendrogliomas, IDH-mutant and 1p/19q-codeleted, arising during teenage years often lack TERT promoter mutation that is typical of their adult counterparts.

Authors:  Julieann Lee; Angelica R Putnam; Samuel H Chesier; Anuradha Banerjee; Corey Raffel; Jessica Van Ziffle; Courtney Onodera; James P Grenert; Boris C Bastian; Arie Perry; David A Solomon
Journal:  Acta Neuropathol Commun       Date:  2018-09-19       Impact factor: 7.801

Review 9.  Pathology, diagnostics, and classification of medulloblastoma.

Authors:  Brent A Orr
Journal:  Brain Pathol       Date:  2020-05       Impact factor: 6.508

10.  Clinical and mutational profiles of adult medulloblastoma groups.

Authors:  Gabriel Chun-Hei Wong; Kay Ka-Wai Li; Wei-Wei Wang; Anthony Pak-Yin Liu; Queenie Junqi Huang; Aden Ka-Yin Chan; Manix Fung-Man Poon; Nellie Yuk-Fei Chung; Queenie Hoi-Wing Wong; Hong Chen; Danny Tat Ming Chan; Xian-Zhi Liu; Ying Mao; Zhen-Yu Zhang; Zhi-Feng Shi; Ho-Keung Ng
Journal:  Acta Neuropathol Commun       Date:  2020-11-10       Impact factor: 7.801

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