Literature DB >> 29432816

New weapons to penetrate the armor: Novel reagents and assays developed at the NCI RAS Initiative to enable discovery of RAS therapeutics.

Dominic Esposito1, Andrew G Stephen2, Thomas J Turbyville2, Matthew Holderfield2.   

Abstract

Development of therapeutic strategies against RAS-driven cancers has been challenging due in part to a lack of understanding of the biology of the system and the ability to design appropriate assays and reagents for targeted drug discovery efforts. Recent developments in the field have opened up new avenues for exploration both through advances in the number and quality of reagents as well as the introduction of novel biochemical and cell-based assay technologies which can be used for high-throughput screening of compound libraries. The reagents and assays developed at the NCI RAS Initiative offer a suite of new weapons that could potentially be used to enable the next generation of RAS drug discovery efforts with the hope of finding novel therapeutics for a target once deemed undruggable.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Assay development; Biochemical assays; Cell-based assays; Drug discovery; RAS

Mesh:

Substances:

Year:  2018        PMID: 29432816      PMCID: PMC6085166          DOI: 10.1016/j.semcancer.2018.02.006

Source DB:  PubMed          Journal:  Semin Cancer Biol        ISSN: 1044-579X            Impact factor:   15.707


  42 in total

1.  Synthesis of the Rheb and K-Ras4B GTPases.

Authors:  Yong-Xiang Chen; Sebastian Koch; Katharina Uhlenbrock; Katrin Weise; Debapratim Das; Lothar Gremer; Luc Brunsveld; Alfred Wittinghofer; Roland Winter; Gemma Triola; Herbert Waldmann
Journal:  Angew Chem Int Ed Engl       Date:  2010-08-16       Impact factor: 15.336

2.  A gene expression signature associated with "K-Ras addiction" reveals regulators of EMT and tumor cell survival.

Authors:  Anurag Singh; Patricia Greninger; Daniel Rhodes; Louise Koopman; Sheila Violette; Nabeel Bardeesy; Jeff Settleman
Journal:  Cancer Cell       Date:  2009-06-02       Impact factor: 31.743

3.  A homogeneous quenching resonance energy transfer assay for the kinetic analysis of the GTPase nucleotide exchange reaction.

Authors:  Kari Kopra; Alessio Ligabue; Qi Wang; Markku Syrjänpää; Olga Blaževitš; Stefan Veltel; Arjan J van Adrichem; Pekka Hänninen; Daniel Abankwa; Harri Härmä
Journal:  Anal Bioanal Chem       Date:  2014-04-24       Impact factor: 4.142

4.  Structural basis of recognition of farnesylated and methylated KRAS4b by PDEδ.

Authors:  Srisathiyanarayanan Dharmaiah; Lakshman Bindu; Timothy H Tran; William K Gillette; Peter H Frank; Rodolfo Ghirlando; Dwight V Nissley; Dominic Esposito; Frank McCormick; Andrew G Stephen; Dhirendra K Simanshu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

5.  Real-time in vitro measurement of GTP hydrolysis.

Authors:  Adam Shutes; Channing J Der
Journal:  Methods       Date:  2005-10       Impact factor: 3.608

6.  Gene Essentiality Profiling Reveals Gene Networks and Synthetic Lethal Interactions with Oncogenic Ras.

Authors:  Tim Wang; Haiyan Yu; Nicholas W Hughes; Bingxu Liu; Arek Kendirli; Klara Klein; Walter W Chen; Eric S Lander; David M Sabatini
Journal:  Cell       Date:  2017-02-02       Impact factor: 41.582

7.  Calmodulin binds to K-Ras, but not to H- or N-Ras, and modulates its downstream signaling.

Authors:  P Villalonga; C López-Alcalá; M Bosch; A Chiloeches; N Rocamora; J Gil; R Marais; C J Marshall; O Bachs; N Agell
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

8.  Therapeutic strategies for targeting ras proteins.

Authors:  Stephan Gysin; Megan Salt; Amy Young; Frank McCormick
Journal:  Genes Cancer       Date:  2011-03

9.  Using cells devoid of RAS proteins as tools for drug discovery.

Authors:  Jelena Urosevic; Eleanor Y M Sum; Victoria Moneo; Matthias Drosten; Alma Dhawahir; Mercedes Becerra; Amancio Carnero; Mariano Barbacid
Journal:  Mol Carcinog       Date:  2009-11       Impact factor: 4.784

10.  New ligation independent cloning vectors for expression of recombinant proteins with a self-cleaving CPD/6xHis-tag.

Authors:  Marco Biancucci; Jazel S Dolores; Jennifer Wong; Sarah Grimshaw; Wayne F Anderson; Karla J F Satchell; Keehwan Kwon
Journal:  BMC Biotechnol       Date:  2017-01-05       Impact factor: 3.329

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  5 in total

1.  A dataset describing a suite of novel antibody reagents for the RAS signaling network.

Authors:  Regine M Schoenherr; Dongqing Huang; Uliana J Voytovich; Richard G Ivey; Jacob J Kennedy; Richard G Saul; Simona Colantonio; Rhonda R Roberts; Joseph G Knotts; Jan A Kaczmarczyk; Candice Perry; Stephen M Hewitt; William Bocik; Gordon R Whiteley; Tara Hiltke; Emily S Boja; Henry Rodriguez; Jeffrey R Whiteaker; Amanda G Paulovich
Journal:  Sci Data       Date:  2019-08-29       Impact factor: 6.444

2.  Homogeneous Dual-Parametric-Coupled Assay for Simultaneous Nucleotide Exchange and KRAS/RAF-RBD Interaction Monitoring.

Authors:  Kari Kopra; Emmiliisa Vuorinen; Maria Abreu-Blanco; Qi Wang; Ville Eskonen; William Gillette; Arto T Pulliainen; Matthew Holderfield; Harri Härmä
Journal:  Anal Chem       Date:  2020-03-09       Impact factor: 6.986

Review 3.  The Influence of Oncogenic RAS on Chemotherapy and Radiotherapy Resistance Through DNA Repair Pathways.

Authors:  Rodrigo E Cáceres-Gutiérrez; Yair Alfaro-Mora; Marco A Andonegui; José Díaz-Chávez; Luis A Herrera
Journal:  Front Cell Dev Biol       Date:  2022-03-11

4.  The bacterial Ras/Rap1 site-specific endopeptidase RRSP cleaves Ras through an atypical mechanism to disrupt Ras-ERK signaling.

Authors:  Marco Biancucci; George Minasov; Avik Banerjee; Alfa Herrera; Patrick J Woida; Matthew B Kieffer; Lakshman Bindu; Maria Abreu-Blanco; Wayne F Anderson; Vadim Gaponenko; Andrew G Stephen; Matthew Holderfield; Karla J F Satchell
Journal:  Sci Signal       Date:  2018-10-02       Impact factor: 9.517

5.  An In Vivo Inflammatory Loop Potentiates KRAS Blockade.

Authors:  Kristina A M Arendt; Giannoula Ntaliarda; Vasileios Armenis; Danai Kati; Christin Henning; Georgia A Giotopoulou; Mario A A Pepe; Laura V Klotz; Anne-Sophie Lamort; Rudolf A Hatz; Sebastian Kobold; Andrea C Schamberger; Georgios T Stathopoulos
Journal:  Biomedicines       Date:  2022-03-03
  5 in total

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