| Literature DB >> 29416745 |
Yun Wu1,2, Fen Liu1, Xiang Ma1,3, Dilare Adi1,3, Ming-Tao Gai1, Xiang Jin1,4, Yi-Ning Yang1,3, Ying Huang1,3, Xiang Xie1,3, Xiao-Mei Li1,3, Zhen-Yan Fu1,3, Bang-Dang Chen3, Yi-Tong Ma1,3.
Abstract
The proteome profile changes after acute myocardial infarction (AMI) and the roles played by important protein species remain poorly understood. Here, we constructed a mouse AMI model by ligating the left coronary artery of male C57B/6J mice to investigate the molecular changes after AMI on the protein level. Total proteins of the left ventricle were extracted and quantitatively analyzed by isobaric tags using relative and absolute quantitation (iTRAQ) technologies. The transcript and protein levels of important genes were further validated using quantitative polymerase chain reaction and western blot. An oxygen and glucose deprivation/reperfusion cell model was constructed using H9C2 cells to further validate the expression patterns and functions of important proteins after hypoxia. Seven hundred seventy-six proteins were identified as differentially abundant proteins after AMI, of which 406 were accumulated, and 370 were reduced. Gene ontology enrichment analysis showed that the most enriched molecular function category terms were binding, including calcium ion biding, GTP binding, actin binding and lipid binding. The expression levels of vitamin D binding protein (VDBP) and its related proteins were increased in both left ventricular tissue and H9C2 cells after ischemia-hypoxia. Overexpression of VDBP in H9C2 cells reduced vitamin D receptor and promoted the cell apoptosis rate after hypoxia. Our data provided new insights into proteome profile changes after AMI and indicated that VDBP could promote cardiomyocyte apoptosis after hypoxia.Entities:
Keywords: acute myocardial infarction; isobaric tags for relative and absolute quantitation; quantitative proteomics; vitamin D binding protein
Year: 2017 PMID: 29416745 PMCID: PMC5788613 DOI: 10.18632/oncotarget.23025
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Workflow of iTRAQ analysis of acute myocardial infarction mouse model
Left ventricles were obtained from acute myocardial infarction model mice at 3 days and 7 days after surgery (MI-3d and MI-7d) and sham operation (Sham-3d and Sham-7d). Eight independent biological duplicates were used for each group. Pooled protein samples were digested by trypsin. Two technical replicates were performed for each group (isobaric tags 113 and 114 for sham-3d; 115 and 116 for sham-7d; 117 and 118 for MI-3d; 119 and 121 for MI-7d). iTRAQ-labeled peptides were subsequently fractionated by HPLC and then were analyzed by LC-MS/MS.
Echocardiographic and hemodynamic measurements at 3 days (MI-3d) and 7 days (MI-7d) after AMI
| Parameters | After 3 d | After 7 d | ||
|---|---|---|---|---|
| Sham-3d ( | MI-3d ( | Sham-7d ( | MI-7d ( | |
| LVEDd (mm) | 3.31 ± 0.28 | 4.39 ± 0.31*** | 3.32 ± 0.40 | 5.36 ± 0.50### |
| LVESd (mm) | 1.66 ± 0.31 | 3.45 ± 0.75*** | 1.64 ± 0.28 | 4.75 ± 0.63### |
| ExLVDd (mm) | 4.73 ± 0.40 | 5.40 ± 0.48** | 4.64 ± 0.37 | 6.22 ± 0.41### |
| LVAWs (mm) | 1.42 ± 0.12 | 0.40 ± 0.10*** | 1.35 ± 0.12 | 0.41 ± 0.23### |
| LVAWd (mm) | 0.85 ± 0.16 | 0.39 ± 0.16*** | 0.79 ± 0.11 | 0.33 ± 0.14### |
| FS (%) | 49.84 ± 8.56 | 21.71 ± 15.59*** | 49.81 ± 10.49 | 11.69 ± 5.79### |
| HR (beats/min) | 344.75 ± 17.47 | 347.78 ± 29.55 | 366.22 ± 20.50 | 343.57 ± 35.99 |
| SBP (mm Hg) | 112.13 ± 25.33 | 84.67 ± 9.99** | 110.56 ± 18.21 | 81.57 ± 13.20## |
| DBP (mm Hg) | 79.63 ± 17.79 | 69.33 ± 11.03 | 74.78 ± 13.74 | 67.29 ± 11.01 |
| LVSP (mm Hg) | 113.75 ± 22.60 | 92.67 ± 9.98* | 105.44 ± 16.74 | 88.86 ± 12.21 |
| +dP/dt (mm Hg/s) | 9981.5 ± 2502.60 | 6243.89 ± 1401.72*** | 8193.78 ± 1821.76 | 4847.29 ± 1386.83## |
| -dP/dt (mm Hg) | 9243.50 ± 2205.78 | 5607.00 ± 1816.97*** | 8697.78 ± 1703.62 | 3883.00 ± 728.92### |
*p < 0.05 versus Sham-3d; **p < 0.01 versus Sham-3d; ***p < 0.001 versus Sham-3d
#p < 0.05 versus Sham-7d; ##p < 0.01 versus Sham-7d; ###p < 0.001 versus Sham-7d
$, echocardiography parameters; BW, body weight; LVEDd, left ventricular internal end-diastolic diameters; LVESd, left ventricular internal end-systolic diameter; ExLVDd, external left ventricular diastolic diameter; LVAWs, left ventricular systolic anterior wall thickness; LVAWd, left ventricular diastolic anterior wall thickness; FS, fractional shortening. Hemodynamic parameters, HR, heart rate; SBP, systolic blood pressure; DBP, diastolic blood pressure; LVSP, left ventricular systolic pressure; dP/dtmax, maximal rates of rise in left ventricular pressure; dP/dtmin, maximal rates of fall in left ventricular pressure.
Figure 2Heat map and Venn diagram of significantly differential abundant proteins
(A) Heat map of 776 proteins that showed significantly differential accumulation levels in either MI-3d or MI-7d. S3, Sham-3d; S7, Sham-7d; M3, MI-3d; M7, MI-7d. The protein accumulation patterns in cluster I to cluster VI are indicated. (B) Venn diagram of proteins preferentially accumulated in MI-3d (blue) and MI-7d (yellow). (C) Venn diagram of proteins significantly reduced in MI-3d (blue) and MI-7d (yellow).
Information of enriched GO terms of MI-3d and MI-7d special accumulated proteins
| GO_acc. | GO Terms | No. Proteins | FDR- |
|---|---|---|---|
| GO:0006957 | complement activation, alternative pathway | 5 | 4.60E-09 |
| GO:0006412 | translation | 12 | 4.60E-09 |
| GO:0006810 | transport | 17 | 1.30E-05 |
| GO:0006461 | protein complex assembly | 6 | 0.00035 |
| GO:0044057 | regulation of system process | 5 | 0.0013 |
| GO:0006873 | cellular ion homeostasis | 5 | 0.0034 |
| GO:0010033 | response to organic substance | 6 | 0.0051 |
| GO:0006066 | alcohol metabolic process | 5 | 0.0051 |
| GO:0030833 | regulation of actin filament polymerization | 9 | 3.00E-09 |
| GO:0008380 | RNA splicing | 11 | 1.90E-06 |
| GO:0016192 | vesicle-mediated transport | 16 | 3.60E-06 |
| GO:0031589 | cell-substrate adhesion | 8 | 7.70E-06 |
| GO:0006397 | mRNA processing | 11 | 2.00E-05 |
| GO:0030198 | extracellular matrix organization | 7 | 0.00013 |
| GO:0019725 | cellular homeostasis | 12 | 0.0004 |
| GO:0019752 | carboxylic acid metabolic process | 12 | 0.002 |
| GO:0051260 | protein homooligomerization | 5 | 0.0026 |
| GO:0006486 | protein amino acid glycosylation | 5 | 0.0034 |
| GO:0007242 | intracellular signaling cascade | 16 | 0.0039 |
| GO:0006886 | intracellular protein transport | 8 | 0.0062 |
| GO:0001568 | blood vessel development | 8 | 0.0078 |
| GO:0043066 | negative regulation of apoptosis | 8 | 0.009 |
Figure 3Quantitative PCR and western blot validation of VDBP in OGD/R cultured cells (each group, n = 5)
(A) The cell survival rate at different times in OGD/R-cultured cells determined by MTS. (B) Real-time quantitative PCR of VDBP gene at different times after OGD/R culture. (C) Western blot (upper) and the gray signal intensities (lower) of VDBP for OGD/R-cultured cells at different times.
Figure 4Overexpression of VDBP in H9C2 cells reducing the expression level of vitamin D receptor after OGD/R culture (each group, n = 5)
Relative expression levels of VDBP (A), VDR (B) and GSN (C) were determined by quantitative PCR in H9C2 cells at 0 h and 6 h of OGD/R culture. Mock, standard H9C2 cells; NC, cells transfected with blank vectors as negative control; VDBP, cells transfected with VDBP overexpression vectors. The expression level of each gene in mock 0 h was set at 1. (D) Protein levels of VDBP, VDR and GSN were determined by western blot. GAPDH was used as a control.
Figure 5Overexpression of VDBP increased the OGD/R-induced cell apoptosis in H9C2 cells (each group, n = 5)
Apoptosis was measured using TUNEL and flow cytometry assays in VDBP-overexpressed H9C2 cells. (A) TUNEL (red channel) assay showed the apoptosis of H9C2 cells, and DAPI (blue channel) was used to locate the nuclei of the cells. Merged images indicate cells only stained by DAPI. (B) Annexin V/7-AAD double-staining assay was used to quantify apoptosis rates in H9C2 cells by flow cytometry at 0 h and 6 h after OGD/R. Mock, standard H9C2 cells; NC, cells transfected with blank vectors as negative control; VDBP, cells transfected with VDBP overexpression vectors.