Literature DB >> 29405082

Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.

Luana Nepomueceno Costa Lima1,2, Cristiane Cunha Frota1, Phillip Noel Suffys3, Amanda Nogueira Brum Fontes3, Rosa Maria Salani Mota4, Rosa Livia Freitas Almeida5, Maria Araci de Andrade Pontes6, Heitor de Sá Gonçalves6, Carl Kendall7, Ligia Regina Sansigolo Kerr8.   

Abstract

This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.

Entities:  

Keywords:  Brazil; Leprosy; Mycobacterium leprae; VNTR loci; cluster analysis; genetic marker; genotype; nasal cavity

Mesh:

Year:  2018        PMID: 29405082      PMCID: PMC6056818          DOI: 10.1080/20477724.2018.1427308

Source DB:  PubMed          Journal:  Pathog Glob Health        ISSN: 2047-7724            Impact factor:   2.894


  27 in total

1.  Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis.

Authors:  Pushpendra Singh; Andrej Benjak; Verena J Schuenemann; Alexander Herbig; Charlotte Avanzi; Philippe Busso; Kay Nieselt; Johannes Krause; Lucio Vera-Cabrera; Stewart T Cole
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

2.  Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity.

Authors:  P R Hunter; M A Gaston
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

3.  Conservation of genomic sequences among isolates of Mycobacterium leprae.

Authors:  J E Clark-Curtiss; G P Walsh
Journal:  J Bacteriol       Date:  1989-09       Impact factor: 3.490

4.  Microsatellite mapping of Mycobacterium leprae populations in infected humans.

Authors:  Saroj K Young; G Michael Taylor; Suman Jain; Lavanya M Suneetha; Sujai Suneetha; Diana N J Lockwood; Douglas B Young
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

5.  VNTR typing of Mycobacterium leprae in South Indian leprosy patients.

Authors:  Vidyagouri Shinde; Hema Newton; Rama Murthy Sakamuri; Venkateshwar Reddy; Suman Jain; Abraham Joseph; Tom Gillis; Indira Nath; Gift Norman; Varalakshmi Vissa
Journal:  Lepr Rev       Date:  2009-09       Impact factor: 0.537

6.  Genotyping of Mycobacterium leprae present on Ziehl-Neelsen-stained microscopic slides and in skin biopsy samples from leprosy patients in different geographic regions of Brazil.

Authors:  Amanda Nogueira Brum Fontes; Harrison Magdinier Gomes; Marcelo Ivens de Araujo; Edson Cláudio Araripe de Albuquerque; Ida Maria Foschiani Dias Baptista; Maria Manuela da Fonseca Moura; Denise Silva Rezende; Maria Cristina Vidal Pessolani; Flávio Alves Lara; Maria Araci de Andrade Pontes; Heitor de Sá Gonçalves; Norma Lucena-Silva; Euzenir Nunes Sarno; Varalakshmi D Vissa; Patrick J Brennan; Philip Noel Suffys
Journal:  Mem Inst Oswaldo Cruz       Date:  2012-12       Impact factor: 2.743

7.  Population-based molecular epidemiology of leprosy in Cebu, Philippines.

Authors:  Rama Murthy Sakamuri; Miyako Kimura; Wei Li; Hyun-Chul Kim; Hyeyoung Lee; Madanahally D Kiran; William C Black; Marivic Balagon; Robert Gelber; Sang-Nae Cho; Patrick J Brennan; Varalakshmi Vissa
Journal:  J Clin Microbiol       Date:  2009-07-01       Impact factor: 5.948

8.  Genotypic variation and stability of four variable-number tandem repeats and their suitability for discriminating strains of Mycobacterium leprae.

Authors:  Richard Truman; Amanda B Fontes; Antonio B De Miranda; Philip Suffys; Thomas Gillis
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

9.  Identification and distribution of Mycobacterium leprae genotypes in a region of high leprosy prevalence in China: a 3-year molecular epidemiological study.

Authors:  Xiaoman Weng; Zheng Wang; Jian Liu; Miyako Kimura; William C Black; Patrick J Brennan; Huanying Li; Varalakshmi D Vissa
Journal:  J Clin Microbiol       Date:  2007-04-11       Impact factor: 5.948

10.  Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics.

Authors:  Christophe Sola; Ingrid Filliol; Eric Legrand; Sarah Lesjean; Camille Locht; Philippe Supply; Nalin Rastogi
Journal:  Infect Genet Evol       Date:  2003-07       Impact factor: 3.342

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