Literature DB >> 29398773

The Emergence of Earliest Angiosperms may be Earlier than Fossil Evidence Indicates.

Karsten Salomo1, James F Smith2, Taylor S Feild3, Marie-Stéphanie Samain4,5, Laura Bond2, Christopher Davidson6, Jay Zimmers2, Christoph Neinhuis1, Stefan Wanke1.   

Abstract

Gaps between molecular ages and fossils undermine the validity of time-calibrated molecular phylogenies. An example of the time gap surrounds the age of angiosperm's origin. We calculate molecular ages of the earliest flowering plant lineages using 22 fossil calibrations (101 genera, 40 families). Our results reveal the origin of angiosperms at the late Permian, ~275 million years ago. Different prior probability curves of molecular age calculations on dense calibration point distributions had little effect on overall age estimates compared to the effects of altered calibration points. The same is true for reasonable root age constraints. We conclude that our age estimates based on multiple datasets, priors, and calibration points are robust and the true ages are likely between our extremes. Our results, when integrated with the ecophysiological evolution of early angiosperms, imply that the ecology of the earliest angiosperms is critical to understand the pre-Cretaceous evolution of flowering plants.

Entities:  

Keywords:  Calibration density; Permian; ecophysiology; molecular dating; origin of angiosperms; rate heterogeneity

Year:  2017        PMID: 29398773      PMCID: PMC5792071          DOI: 10.1600/036364417X696438

Source DB:  PubMed          Journal:  Syst Bot        ISSN: 0363-6445            Impact factor:   1.101


  53 in total

1.  A likelihood method for assessing molecular divergence time estimates and the placement of fossil calibrations.

Authors:  R Alexander Pyron
Journal:  Syst Biol       Date:  2009-12-17       Impact factor: 15.683

2.  SeqState: primer design and sequence statistics for phylogenetic DNA datasets.

Authors:  Kai Müller
Journal:  Appl Bioinformatics       Date:  2005

3.  Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms.

Authors:  Michael J Moore; Charles D Bell; Pamela S Soltis; Douglas E Soltis
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-28       Impact factor: 11.205

4.  Ancestral xerophobia: a hypothesis on the whole plant ecophysiology of early angiosperms.

Authors:  T S Feild; D S Chatelet; T J Brodribb
Journal:  Geobiology       Date:  2009-02-27       Impact factor: 4.407

5.  Establishing a fossil record for the perianthless Piperales: Saururus tuckerae sp. nov. (Saururaceae) from the Middle Eocene Princeton Chert.

Authors:  Selena Y Smith; Ruth A Stockey
Journal:  Am J Bot       Date:  2007-10       Impact factor: 3.844

6.  Fossil evidence and phylogeny: the age of major angiosperm clades based on mesofossil and macrofossil evidence from Cretaceous deposits.

Authors:  William L Crepet; Kevin C Nixon; Maria A Gandolfo
Journal:  Am J Bot       Date:  2004-10       Impact factor: 3.844

7.  Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification.

Authors:  Robert W Meredith; Jan E Janečka; John Gatesy; Oliver A Ryder; Colleen A Fisher; Emma C Teeling; Alisha Goodbla; Eduardo Eizirik; Taiz L L Simão; Tanja Stadler; Daniel L Rabosky; Rodney L Honeycutt; John J Flynn; Colleen M Ingram; Cynthia Steiner; Tiffani L Williams; Terence J Robinson; Angela Burk-Herrick; Michael Westerman; Nadia A Ayoub; Mark S Springer; William J Murphy
Journal:  Science       Date:  2011-09-22       Impact factor: 47.728

Review 8.  Molecular-clock methods for estimating evolutionary rates and timescales.

Authors:  Simon Y W Ho; Sebastián Duchêne
Journal:  Mol Ecol       Date:  2014-10-30       Impact factor: 6.185

9.  Angiosperm leaf vein evolution was physiologically and environmentally transformative.

Authors:  C Kevin Boyce; Tim J Brodribb; Taylor S Feild; Maciej A Zwieniecki
Journal:  Proc Biol Sci       Date:  2009-02-25       Impact factor: 5.349

10.  Tectonic-driven climate change and the diversification of angiosperms.

Authors:  Anne-Claire Chaboureau; Pierre Sepulchre; Yannick Donnadieu; Alain Franc
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-15       Impact factor: 11.205

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  6 in total

1.  The newly developed single nucleotide polymorphism (SNP) markers for a potentially medicinal plant, Crepidiastrum denticulatum (Asteraceae), inferred from complete chloroplast genome data.

Authors:  Hoang Dang Khoa Do; Joonhyung Jung; JongYoung Hyun; Seok Jeong Yoon; Chaejin Lim; Keedon Park; Joo-Hwan Kim
Journal:  Mol Biol Rep       Date:  2019-04-12       Impact factor: 2.316

2.  Metagenomes of a Freshwater Charavirus from British Columbia Provide a Window into Ancient Lineages of Viruses.

Authors:  Marli Vlok; Adrian J Gibbs; Curtis A Suttle
Journal:  Viruses       Date:  2019-03-25       Impact factor: 5.048

3.  Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths.

Authors:  Akito Y Kawahara; David Plotkin; Marianne Espeland; Karen Meusemann; Emmanuel F A Toussaint; Alexander Donath; France Gimnich; Paul B Frandsen; Andreas Zwick; Mario Dos Reis; Jesse R Barber; Ralph S Peters; Shanlin Liu; Xin Zhou; Christoph Mayer; Lars Podsiadlowski; Caroline Storer; Jayne E Yack; Bernhard Misof; Jesse W Breinholt
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-21       Impact factor: 11.205

4.  Genome-wide macroevolutionary signatures of key innovations in butterflies colonizing new host plants.

Authors:  Rémi Allio; Benoit Nabholz; Stefan Wanke; Guillaume Chomicki; Oscar A Pérez-Escobar; Adam M Cotton; Anne-Laure Clamens; Gaël J Kergoat; Felix A H Sperling; Fabien L Condamine
Journal:  Nat Commun       Date:  2021-01-13       Impact factor: 14.919

5.  Phylogenomic Insights into Deep Phylogeny of Angiosperms Based on Broad Nuclear Gene Sampling.

Authors:  Lingxiao Yang; Danyan Su; Xin Chang; Charles S P Foster; Linhua Sun; Chien-Hsun Huang; Xiaofan Zhou; Liping Zeng; Hong Ma; Bojian Zhong
Journal:  Plant Commun       Date:  2020-02-04

6.  Discordant Phylogenomic Placement of Hydnoraceae and Lactoridaceae Within Piperales Using Data From All Three Genomes.

Authors:  Matthias Jost; Marie-Stéphanie Samain; Isabel Marques; Sean W Graham; Stefan Wanke
Journal:  Front Plant Sci       Date:  2021-04-12       Impact factor: 5.753

  6 in total

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