Literature DB >> 29389963

Correction: An ImmunoSignature test distinguishes Trypanosoma cruzi, hepatitis B, hepatitis C and West Nile virus seropositivity among asymptomatic blood donors.

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Abstract

[This corrects the article DOI: 10.1371/journal.pntd.0005882.].

Entities:  

Year:  2018        PMID: 29389963      PMCID: PMC5794065          DOI: 10.1371/journal.pntd.0006228

Source DB:  PubMed          Journal:  PLoS Negl Trop Dis        ISSN: 1935-2727


There are errors in Tables 3–5 which arose during typesetting. The publisher apologizes for these errors.
Table 3

Top ranking alignments of informative library peptides to the T. cruzi proteome.

T. cruzi proteinTotalScoreTarget 20mer# peptide hitsTrTrypDB Gene ID
1Mucin: TcMucII*3473TRAPSRLREVDGSLGSSAWV63TcCLB.509753.300
2Uncharacterized protein3329RRLSYRLRKREDGESYESYL59TcCLB.510575.140
3Uncharacterized protein3181VPVLRVVDAEADERERNGAG56TCSYLVIO_001012
4Calmodulin*3096TEVDVREALRVLDADGDGFL57TcCLB.510121.50
5Uncharacterized protein3091SYRQQRYVDALRFALEEDHE56TcCLB.508269.50
6Mucin: TcMucII*3032RAPSRLREFDGSLSSSAWVC56TcCLB.506741.110
7Uncharacterized protein3007KLRQLDFVEDVLRKHPDKVE52TcCLB.507011.170
8Dispersed gene family protein 1 (DGF-1)*2983HRGGLEALLRDGEDGDEDAQ58TcCLB.509735.84
9Uncharacterized protein2973LPAQDSVVVRRLVDGQAPLR51TcCLB.506267.48
10Vacuolar protein sorting-associated protein (Vps26)2966ERSPGLLGRLLRKVDGCDVR52TCSYLVIO_008174

* The families in which these proteins are members have been previously identified as antigenic

Table 5

Confusion matrix and performance estimates of the multiclass prediction model.

IST ClassificationBlood Bank Confirmed DiagnosisPerformance Summary
T. cruzi +HBV+HCV+WNV+SensaSpecbAUC
T. cruzi+7731293%96%0.98
HBV+37912282%96%0.96
HCV+0355292%94%0.95
WNV+8338285%97%0.97
Totals88887188Overall accuracy = 87%

aSens, sensitivity

bSpec, specificity

* The families in which these proteins are members have been previously identified as antigenic aspec, specificity bsens, sensitivity aSens, sensitivity bSpec, specificity
Table 4

Binary classification of each of four disease classes versus a combined class of the remaining three.

ClassesAUCSensitivity@90% specaSpecificity@90% sensbAccuracy@speca=sensbModel size(k)
T. cruzi vs.Other0.97(0.96-0.98)92%(90%-94%)94%(90%-96%)92%(90%-92%)50
HBV vs.Other0.94(0.93-0.95)85%(78%-90%)85%(78%-90%)87%(85%-90%)16000
HCV vs.Other0.96(0.94-0.97)90%(86%-94%)91%(82%-96%)90%(88%-93%)100
WNV vs.Other0.96(0.95-0.97)87%(78%-94%)88%(84%-92%)89%(86%-91%)1000

aspec, specificity

bsens, sensitivity

  1 in total

1.  An ImmunoSignature test distinguishes Trypanosoma cruzi, hepatitis B, hepatitis C and West Nile virus seropositivity among asymptomatic blood donors.

Authors:  Michael Rowe; Jonathan Melnick; Robert Gerwien; Joseph B Legutki; Jessica Pfeilsticker; Theodore M Tarasow; Kathryn F Sykes
Journal:  PLoS Negl Trop Dis       Date:  2017-09-05
  1 in total

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