Literature DB >> 29379215

Rhizobia: from saprophytes to endosymbionts.

Philip Poole1, Vinoy Ramachandran1, Jason Terpolilli2.   

Abstract

Rhizobia are some of the best-studied plant microbiota. These oligotrophic Alphaproteobacteria or Betaproteobacteria form symbioses with their legume hosts. Rhizobia must exist in soil and compete with other members of the microbiota before infecting legumes and forming N2-fixing bacteroids. These dramatic lifestyle and developmental changes are underpinned by large genomes and even more complex pan-genomes, which encompass the whole population and are subject to rapid genetic exchange. The ability to respond to plant signals and chemoattractants and to colonize nutrient-rich roots are crucial for the competitive success of these bacteria. The availability of a large body of genomic, physiological, biochemical and ecological studies makes rhizobia unique models for investigating community interactions and plant colonization.

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Year:  2018        PMID: 29379215     DOI: 10.1038/nrmicro.2017.171

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  154 in total

1.  Receptor-mediated exopolysaccharide perception controls bacterial infection.

Authors:  Y Kawaharada; S Kelly; M Wibroe Nielsen; C T Hjuler; K Gysel; A Muszyński; R W Carlson; M B Thygesen; N Sandal; M H Asmussen; M Vinther; S U Andersen; L Krusell; S Thirup; K J Jensen; C W Ronson; M Blaise; S Radutoiu; J Stougaard
Journal:  Nature       Date:  2015-07-08       Impact factor: 49.962

Review 2.  Physiology, genetics, and biochemistry of carbon metabolism in the alphaproteobacterium Sinorhizobium meliloti.

Authors:  Barney A Geddes; Ivan J Oresnik
Journal:  Can J Microbiol       Date:  2014-07-02       Impact factor: 2.419

3.  PLANT MICROBIOME. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.

Authors:  Sarah L Lebeis; Sur Herrera Paredes; Derek S Lundberg; Natalie Breakfield; Jase Gehring; Meredith McDonald; Stephanie Malfatti; Tijana Glavina del Rio; Corbin D Jones; Susannah G Tringe; Jeffery L Dangl
Journal:  Science       Date:  2015-07-16       Impact factor: 47.728

4.  Legumes regulate Rhizobium bacteroid development and persistence by the supply of branched-chain amino acids.

Authors:  J Prell; J P White; A Bourdes; S Bunnewell; R J Bongaerts; P S Poole
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-13       Impact factor: 11.205

5.  Symbiotic autoregulation of nifA expression in Rhizobium leguminosarum bv. viciae.

Authors:  Marta Martínez; José M Palacios; Juan Imperial; Tomás Ruiz-Argüeso
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

6.  Rhizobial peptidase HrrP cleaves host-encoded signaling peptides and mediates symbiotic compatibility.

Authors:  Paul A Price; Houston R Tanner; Brett A Dillon; Mohammed Shabab; Graham C Walker; Joel S Griffitts
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-23       Impact factor: 11.205

7.  The root hair "infectome" of Medicago truncatula uncovers changes in cell cycle genes and reveals a requirement for Auxin signaling in rhizobial infection.

Authors:  Andrew Breakspear; Chengwu Liu; Sonali Roy; Nicola Stacey; Christian Rogers; Martin Trick; Giulia Morieri; Kirankumar S Mysore; Jiangqi Wen; Giles E D Oldroyd; J Allan Downie; Jeremy D Murray
Journal:  Plant Cell       Date:  2014-12-19       Impact factor: 11.277

8.  Structure and function of the bacterial root microbiota in wild and domesticated barley.

Authors:  Davide Bulgarelli; Ruben Garrido-Oter; Philipp C Münch; Aaron Weiman; Johannes Dröge; Yao Pan; Alice C McHardy; Paul Schulze-Lefert
Journal:  Cell Host Microbe       Date:  2015-02-26       Impact factor: 21.023

9.  The NifA-RpoN regulon of Mesorhizobium loti strain R7A and its symbiotic activation by a novel LacI/GalR-family regulator.

Authors:  John T Sullivan; Steven D Brown; Clive W Ronson
Journal:  PLoS One       Date:  2013-01-07       Impact factor: 3.240

10.  Complete Genome Sequence of Mesorhizobium ciceri Strain CC1192, an Efficient Nitrogen-Fixing Microsymbiont of Cicer arietinum.

Authors:  Timothy Haskett; Penghao Wang; Joshua Ramsay; Graham O'Hara; Wayne Reeve; John Howieson; Jason Terpolilli
Journal:  Genome Announc       Date:  2016-06-09
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  89 in total

Review 1.  Deep learning approaches for natural product discovery from plant endophytic microbiomes.

Authors:  Shiva Abdollahi Aghdam; Amanda May Vivian Brown
Journal:  Environ Microbiome       Date:  2021-03-18

2.  An Alkane Sulfonate Monooxygenase Is Required for Symbiotic Nitrogen Fixation by Bradyrhizobium diazoefficiens (syn. Bradyrhizobium japonicum) USDA110T.

Authors:  Justin J Speck; Euan K James; Masayuki Sugawara; Michael J Sadowsky; Prasad Gyaneshwar
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

3.  A Sulfoglycolytic Entner-Doudoroff Pathway in Rhizobium leguminosarum bv. trifolii SRDI565.

Authors:  Jinling Li; Ruwan Epa; Nichollas E Scott; Dominik Skoneczny; Mahima Sharma; Alexander J D Snow; James P Lingford; Ethan D Goddard-Borger; Gideon J Davies; Malcolm J McConville; Spencer J Williams
Journal:  Appl Environ Microbiol       Date:  2020-07-20       Impact factor: 4.792

4.  Occurrence of diverse Bradyrhizobium spp. in roots and rhizospheres of two commercial Brazilian sugarcane cultivars.

Authors:  Ivan de Alencar Menezes Júnior; Gustavo Feitosa de Matos; Karine Moura de Freitas; Ederson da Conceição Jesus; Luc Felicianus Marie Rouws
Journal:  Braz J Microbiol       Date:  2019-05-29       Impact factor: 2.476

5.  Lifestyle adaptations of Rhizobium from rhizosphere to symbiosis.

Authors:  Rachel M Wheatley; Brandon L Ford; Li Li; Samuel T N Aroney; Hayley E Knights; Raphael Ledermann; Alison K East; Vinoy K Ramachandran; Philip S Poole
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-08       Impact factor: 11.205

6.  Genomic dissection of an extended phenotype: Oak galling by a cynipid gall wasp.

Authors:  Jack Hearn; Mark Blaxter; Karsten Schönrogge; José-Luis Nieves-Aldrey; Juli Pujade-Villar; Elisabeth Huguet; Jean-Michel Drezen; Joseph D Shorthouse; Graham N Stone
Journal:  PLoS Genet       Date:  2019-11-04       Impact factor: 5.917

Review 7.  Speaking the language of lipids: the cross-talk between plants and pathogens in defence and disease.

Authors:  Ana Rita Cavaco; Ana Rita Matos; Andreia Figueiredo
Journal:  Cell Mol Life Sci       Date:  2021-02-27       Impact factor: 9.261

8.  Coordinated Regulation of the Size and Number of Polyhydroxybutyrate Granules by Core and Accessory Phasins in the Facultative Microsymbiont Sinorhizobium fredii NGR234.

Authors:  Yan-Wei Sun; Yan Li; Yue Hu; Wen-Xin Chen; Chang-Fu Tian
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

9.  Eco-evolutionary feedbacks mediated by bacterial membrane vesicles.

Authors:  Nikola Zlatkov; Aftab Nadeem; Bernt Eric Uhlin; Sun Nyunt Wai
Journal:  FEMS Microbiol Rev       Date:  2021-03-16       Impact factor: 16.408

Review 10.  Gene Expression in Nitrogen-Fixing Symbiotic Nodule Cells in Medicago truncatula and Other Nodulating Plants.

Authors:  Peter Mergaert; Attila Kereszt; Eva Kondorosi
Journal:  Plant Cell       Date:  2019-11-11       Impact factor: 11.277

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