Literature DB >> 29374858

Tools for Visualizing HIV in Cure Research.

Julia Niessl1,2, Amy E Baxter1,2, Daniel E Kaufmann3,4.   

Abstract

PURPOSE OF REVIEW: The long-lived HIV reservoir remains a major obstacle for an HIV cure. Current techniques to analyze this reservoir are generally population-based. We highlight recent developments in methods visualizing HIV, which offer a different, complementary view, and provide indispensable information for cure strategy development. RECENT
FINDINGS: Recent advances in fluorescence in situ hybridization techniques enabled key developments in reservoir visualization. Flow cytometric detection of HIV mRNAs, concurrently with proteins, provides a high-throughput approach to study the reservoir on a single-cell level. On a tissue level, key spatial information can be obtained detecting viral RNA and DNA in situ by fluorescence microscopy. At total-body level, advancements in non-invasive immuno-positron emission tomography (PET) detection of HIV proteins may allow an encompassing view of HIV reservoir sites. HIV imaging approaches provide important, complementary information regarding the size, phenotype, and localization of the HIV reservoir. Visualizing the reservoir may contribute to the design, assessment, and monitoring of HIV cure strategies in vitro and in vivo.

Entities:  

Keywords:  Flow cytometry; HIV cure; In situ hybridization (ISH); Microscopy; Positron emission tomography (PET); RNA flow; Viral reservoir

Mesh:

Substances:

Year:  2018        PMID: 29374858      PMCID: PMC5878129          DOI: 10.1007/s11904-018-0376-1

Source DB:  PubMed          Journal:  Curr HIV/AIDS Rep        ISSN: 1548-3568            Impact factor:   5.071


  64 in total

1.  Nanoparticle-based flow virometry for the analysis of individual virions.

Authors:  Anush Arakelyan; Wendy Fitzgerald; Leonid Margolis; Jean-Charles Grivel
Journal:  J Clin Invest       Date:  2013-08-08       Impact factor: 14.808

2.  Rapid degradation of CD4 in cells expressing human immunodeficiency virus type 1 Env and Vpu is blocked by proteasome inhibitors.

Authors:  K Fujita; S Omura; J Silver
Journal:  J Gen Virol       Date:  1997-03       Impact factor: 3.891

3.  Persistent HIV-1 replication is associated with lower antiretroviral drug concentrations in lymphatic tissues.

Authors:  Courtney V Fletcher; Kathryn Staskus; Stephen W Wietgrefe; Meghan Rothenberger; Cavan Reilly; Jeffrey G Chipman; Greg J Beilman; Alexander Khoruts; Ann Thorkelson; Thomas E Schmidt; Jodi Anderson; Katherine Perkey; Mario Stevenson; Alan S Perelson; Daniel C Douek; Ashley T Haase; Timothy W Schacker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

4.  Concurrent measures of total and integrated HIV DNA monitor reservoirs and ongoing replication in eradication trials.

Authors:  Angela M Mexas; Erin H Graf; Matthew J Pace; Jianqing J Yu; Emmanouil Papasavvas; Livio Azzoni; Michael P Busch; Michele Di Mascio; Andrea S Foulkes; Stephen A Migueles; Luis J Montaner; Una O'Doherty
Journal:  AIDS       Date:  2012-11-28       Impact factor: 4.177

5.  Visualizing antigen-specific and infected cells in situ predicts outcomes in early viral infection.

Authors:  Qingsheng Li; Pamela J Skinner; Sang-Jun Ha; Lijie Duan; Teresa L Mattila; Aaron Hage; Cara White; Daniel L Barber; Leigh O'Mara; Peter J Southern; Cavan S Reilly; John V Carlis; Christopher J Miller; Rafi Ahmed; Ashley T Haase
Journal:  Science       Date:  2009-03-27       Impact factor: 47.728

6.  Histo-cytometry: a method for highly multiplex quantitative tissue imaging analysis applied to dendritic cell subset microanatomy in lymph nodes.

Authors:  Michael Y Gerner; Wolfgang Kastenmuller; Ina Ifrim; Juraj Kabat; Ronald N Germain
Journal:  Immunity       Date:  2012-08-02       Impact factor: 31.745

7.  Multiparametric characterization of rare HIV-infected cells using an RNA-flow FISH technique.

Authors:  Amy E Baxter; Julia Niessl; Rémi Fromentin; Jonathan Richard; Filippos Porichis; Marta Massanella; Nathalie Brassard; Nirmin Alsahafi; Jean-Pierre Routy; Andrés Finzi; Nicolas Chomont; Daniel E Kaufmann
Journal:  Nat Protoc       Date:  2017-09-07       Impact factor: 13.491

8.  HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation.

Authors:  Nicolas Chomont; Mohamed El-Far; Petronela Ancuta; Lydie Trautmann; Francesco A Procopio; Bader Yassine-Diab; Geneviève Boucher; Mohamed-Rachid Boulassel; Georges Ghattas; Jason M Brenchley; Timothy W Schacker; Brenna J Hill; Daniel C Douek; Jean-Pierre Routy; Elias K Haddad; Rafick-Pierre Sékaly
Journal:  Nat Med       Date:  2009-06-21       Impact factor: 53.440

9.  Sensitive quantification of the HIV-1 reservoir in gut-associated lymphoid tissue.

Authors:  Sara Morón-López; Maria C Puertas; Cristina Gálvez; Jordi Navarro; Anna Carrasco; Maria Esteve; Josep Manyé; Manel Crespo; Maria Salgado; Javier Martinez-Picado
Journal:  PLoS One       Date:  2017-04-17       Impact factor: 3.240

10.  A Subset of CD4/CD8 Double-Negative T Cells Expresses HIV Proteins in Patients on Antiretroviral Therapy.

Authors:  Laura K DeMaster; Xiaohe Liu; D Jake VanBelzen; Benjamin Trinité; Lingjie Zheng; Luis M Agosto; Stephen A Migueles; Mark Connors; Lidia Sambucetti; David N Levy; Alexander O Pasternak; Una O'Doherty
Journal:  J Virol       Date:  2015-11-04       Impact factor: 5.103

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  4 in total

1.  Roadmap toward the 10 ps time-of-flight PET challenge.

Authors:  Paul Lecoq; Christian Morel; John O Prior; Dimitris Visvikis; Stefan Gundacker; Etiennette Auffray; Peter Križan; Rosana Martinez Turtos; Dominique Thers; Edoardo Charbon; Joao Varela; Christophe de La Taille; Angelo Rivetti; Dominique Breton; Jean-François Pratte; Johan Nuyts; Suleman Surti; Stefaan Vandenberghe; Paul Marsden; Katia Parodi; Jose Maria Benlloch; Mathieu Benoit
Journal:  Phys Med Biol       Date:  2020-10-22       Impact factor: 3.609

Review 2.  Virus Infection Variability by Single-Cell Profiling.

Authors:  Maarit Suomalainen; Urs F Greber
Journal:  Viruses       Date:  2021-08-09       Impact factor: 5.048

3.  Visualization of HIV-1 RNA Transcription from Integrated HIV-1 DNA in Reactivated Latently Infected Cells.

Authors:  Obiaara B Ukah; Maritza Puray-Chavez; Philip R Tedbury; Alon Herschhorn; Joseph G Sodroski; Stefan G Sarafianos
Journal:  Viruses       Date:  2018-09-30       Impact factor: 5.048

Review 4.  Ethical issues in HIV remission trials.

Authors:  Nir Eyal; Lisa G Holtzman; Steven G Deeks
Journal:  Curr Opin HIV AIDS       Date:  2018-09       Impact factor: 4.283

  4 in total

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