Literature DB >> 29374031

Bacterial Catabolism of β-Hydroxypropiovanillone and β-Hydroxypropiosyringone Produced in the Reductive Cleavage of Arylglycerol-β-Aryl Ether in Lignin.

Yudai Higuchi1, Shogo Aoki1, Hiroki Takenami1, Naofumi Kamimura1, Kenji Takahashi1, Shojiro Hishiyama2, Christopher S Lancefield3, O Stephen Ojo3, Yoshihiro Katayama4, Nicholas J Westwood3, Eiji Masai5.   

Abstract

Sphingobium sp. strain SYK-6 converts four stereoisomers of arylglycerol-β-guaiacyl ether into achiral β-hydroxypropiovanillone (HPV) via three stereospecific reaction steps. Here, we determined the HPV catabolic pathway and characterized the HPV catabolic genes involved in the first two steps of the pathway. In SYK-6 cells, HPV was oxidized to vanilloyl acetic acid (VAA) via vanilloyl acetaldehyde (VAL). The resulting VAA was further converted into vanillate through the activation of VAA by coenzyme A. A syringyl-type HPV analog, β-hydroxypropiosyringone (HPS), was also catabolized via the same pathway. SLG_12830 (hpvZ), which belongs to the glucose-methanol-choline oxidoreductase family, was isolated as the HPV-converting enzyme gene. An hpvZ mutant completely lost the ability to convert HPV and HPS, indicating that hpvZ is essential for the conversion of both the substrates. HpvZ produced in Escherichia coli oxidized both HPV and HPS and other 3-phenyl-1-propanol derivatives. HpvZ localized to both the cytoplasm and membrane of SYK-6 and used ubiquinone derivatives as electron acceptors. Thirteen gene products of the 23 aldehyde dehydrogenase (ALDH) genes in SYK-6 were able to oxidize VAL into VAA. Mutant analyses suggested that multiple ALDH genes, including SLG_20400, contribute to the conversion of VAL. We examined whether the genes encoding feruloyl-CoA synthetase (ferA) and feruloyl-CoA hydratase/lyase (ferB and ferB2) are involved in the conversion of VAA. Only FerA exhibited activity toward VAA; however, disruption of ferA did not affect VAA conversion. These results indicate that another enzyme system is involved in VAA conversion.IMPORTANCE Cleavage of the β-aryl ether linkage is the most essential process in lignin biodegradation. Although the bacterial β-aryl ether cleavage pathway and catabolic genes have been well documented, there have been no reports regarding the catabolism of HPV or HPS, the products of cleavage of β-aryl ether compounds. HPV and HPS have also been found to be obtained from lignin by chemoselective catalytic oxidation by 2,3-dichloro-5,6-dicyano-1,4-benzoquinone/tert-butyl nitrite/O2, followed by cleavage of the β-aryl ether with zinc. Therefore, value-added chemicals are expected to be produced from these compounds. In this study, we determined the SYK-6 catabolic pathways for HPV and HPS and identified the catabolic genes involved in the first two steps of the pathways. Since SYK-6 catabolizes HPV through 2-pyrone-4,6-dicarboxylate, which is a building block for functional polymers, characterization of HPV catabolism is important not only for understanding the bacterial lignin catabolic system but also for lignin utilization.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  Sphingobium; aldehyde dehydrogenase; beta-aryl ether; glucose-methanol-choline oxidoreductase; lignin

Mesh:

Substances:

Year:  2018        PMID: 29374031      PMCID: PMC5861824          DOI: 10.1128/AEM.02670-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  60 in total

1.  Efficient production of 2-pyrone 4,6-dicarboxylic acid as a novel polymer-based material from protocatechuate by microbial function.

Authors:  Yuichiro Otsuka; Masaya Nakamura; Kiyotaka Shigehara; Kosuke Sugimura; Eiji Masai; Seiji Ohara; Yoshihiro Katayama
Journal:  Appl Microbiol Biotechnol       Date:  2005-12-02       Impact factor: 4.813

2.  Characterization of p-hydroxycinnamate catabolism in a soil Actinobacterium.

Authors:  Hiroshi Otani; Young-Eun Lee; Israël Casabon; Lindsay D Eltis
Journal:  J Bacteriol       Date:  2014-09-29       Impact factor: 3.490

3.  Sphingobium sp. SYK-6 LigG involved in lignin degradation is structurally and biochemically related to the glutathione transferase ω class.

Authors:  Edgar Meux; Pascalita Prosper; Eiji Masai; Guillermo Mulliert; Stéphane Dumarçay; Mélanie Morel; Claude Didierjean; Eric Gelhaye; Frédérique Favier
Journal:  FEBS Lett       Date:  2012-10-08       Impact factor: 4.124

4.  Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum.

Authors:  A Schäfer; A Tauch; W Jäger; J Kalinowski; G Thierbach; A Pühler
Journal:  Gene       Date:  1994-07-22       Impact factor: 3.688

5.  Cloning and characterization of the ferulic acid catabolic genes of Sphingomonas paucimobilis SYK-6.

Authors:  Eiji Masai; Kyo Harada; Xue Peng; Hirotaka Kitayama; Yoshihiro Katayama; Masao Fukuda
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

6.  Characterization of ligV essential for catabolism of vanillin by Sphingomonas paucimobilis SYK-6.

Authors:  Eiji Masai; Yuko Yamamoto; Tomohiko Inoue; Kazuhiro Takamura; Hirofumi Hara; Daisuke Kasai; Yoshihiro Katayama; Masao Fukuda
Journal:  Biosci Biotechnol Biochem       Date:  2007-10-07       Impact factor: 2.043

7.  Broad host range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium meliloti.

Authors:  G Ditta; S Stanfield; D Corbin; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  Enhancing muconic acid production from glucose and lignin-derived aromatic compounds via increased protocatechuate decarboxylase activity.

Authors:  Christopher W Johnson; Davinia Salvachúa; Payal Khanna; Holly Smith; Darren J Peterson; Gregg T Beckham
Journal:  Metab Eng Commun       Date:  2016-04-22

10.  NCBI BLAST: a better web interface.

Authors:  Mark Johnson; Irena Zaretskaya; Yan Raytselis; Yuri Merezhuk; Scott McGinnis; Thomas L Madden
Journal:  Nucleic Acids Res       Date:  2008-04-24       Impact factor: 16.971

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  3 in total

1.  The Catabolic System of Acetovanillone and Acetosyringone in Sphingobium sp. Strain SYK-6 Useful for Upgrading Aromatic Compounds Obtained through Chemical Lignin Depolymerization.

Authors:  Yudai Higuchi; Naofumi Kamimura; Hiroki Takenami; Yusei Kikuiri; Chieko Yasuta; Kenta Tanatani; Toru Shobuda; Yuichiro Otsuka; Masaya Nakamura; Tomonori Sonoki; Eiji Masai
Journal:  Appl Environ Microbiol       Date:  2022-08-08       Impact factor: 5.005

2.  iNovo479: Metabolic Modeling Provides a Roadmap to Optimize Bioproduct Yield from Deconstructed Lignin Aromatics by Novosphingobium aromaticivorans.

Authors:  Alexandra M Linz; Yanjun Ma; Samuel Scholz; Daniel R Noguera; Timothy J Donohue
Journal:  Metabolites       Date:  2022-04-18

3.  Roles of two glutathione S-transferases in the final step of the β-aryl ether cleavage pathway in Sphingobium sp. strain SYK-6.

Authors:  Yudai Higuchi; Daisuke Sato; Naofumi Kamimura; Eiji Masai
Journal:  Sci Rep       Date:  2020-11-26       Impact factor: 4.379

  3 in total

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