Literature DB >> 29373735

Systematic editing of synthetic RIG-I ligands to produce effective antiviral and anti-tumor RNA immunotherapies.

Janghyun Lee1, Eun-Byeol Park2, Jiyoun Min2, Si-Eun Sung1, Yejin Jang3, Jin Soo Shin3, Dongmin Chun2, Ki-Hun Kim1, Jihyun Hwang1, Mi-Kyung Lee1, Yun Young Go3, Dohyeong Kwon2, Meehyein Kim3, Suk-Jo Kang2, Byong-Seok Choi1.   

Abstract

Retinoic acid-inducible gene I (RIG-I) recognizes double-stranded viral RNAs (dsRNAs) containing two or three 5' phosphates. A few reports of 5'-PPP-independent RIG-I agonists have emerged, but little is known about the molecular principles underlying their recognition. We recently found that the bent duplex RNA from the influenza A panhandle promoter activates RIG-I even in the absence of a 5'-triphosphate moiety. Here, we report that non-canonical synthetic RNA oligonucleotides containing G-U wobble base pairs that form a bent helix can exert RIG-I-mediated antiviral and anti-tumor effects in a sequence- and site-dependent manner. We present synthetic RNAs that have been systematically modified to enhance their efficacy and we outline the basic principles for engineering RIG-I agonists applicable to immunotherapy.

Entities:  

Year:  2018        PMID: 29373735      PMCID: PMC5829749          DOI: 10.1093/nar/gky039

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


This article has been retracted, please see retraction notice 10.1093/nar/gky819 for further details. Click here for additional data file.
  44 in total

1.  The RIG-I ATPase domain structure reveals insights into ATP-dependent antiviral signalling.

Authors:  Filiz Civril; Matthew Bennett; Manuela Moldt; Tobias Deimling; Gregor Witte; Stefan Schiesser; Thomas Carell; Karl-Peter Hopfner
Journal:  EMBO Rep       Date:  2011-10-28       Impact factor: 8.807

2.  VISA is an adapter protein required for virus-triggered IFN-beta signaling.

Authors:  Liang-Guo Xu; Yan-Yi Wang; Ke-Jun Han; Lian-Yun Li; Zhonghe Zhai; Hong-Bing Shu
Journal:  Mol Cell       Date:  2005-09-16       Impact factor: 17.970

3.  The V proteins of simian virus 5 and other paramyxoviruses inhibit induction of interferon-beta.

Authors:  Emma Poole; Biao He; Robert A Lamb; Richard E Randall; Stephen Goodbourn
Journal:  Virology       Date:  2002-11-10       Impact factor: 3.616

4.  Immunogenic cell death of human ovarian cancer cells induced by cytosolic poly(I:C) leads to myeloid cell maturation and activates NK cells.

Authors:  Kirsten Kübler; Carola tho Pesch; Nadine Gehrke; Soheila Riemann; Juliane Dassler; Christoph Coch; Jennifer Landsberg; Vera Wimmenauer; Martin Pölcher; Christian Rudlowski; Thomas Tüting; Walther Kuhn; Gunther Hartmann; Winfried Barchet
Journal:  Eur J Immunol       Date:  2011-08-30       Impact factor: 5.532

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge.

Authors:  F Aboul-ela; J Karn; G Varani
Journal:  Nucleic Acids Res       Date:  1996-10-15       Impact factor: 16.971

7.  Sequence-Specific Modifications Enhance the Broad-Spectrum Antiviral Response Activated by RIG-I Agonists.

Authors:  Cindy Chiang; Vladimir Beljanski; Kevin Yin; David Olagnier; Fethia Ben Yebdri; Courtney Steel; Marie-Line Goulet; Victor R DeFilippis; Daniel N Streblow; Elias K Haddad; Lydie Trautmann; Ted Ross; Rongtuan Lin; John Hiscott
Journal:  J Virol       Date:  2015-05-27       Impact factor: 5.103

8.  Proapoptotic signaling induced by RIG-I and MDA-5 results in type I interferon-independent apoptosis in human melanoma cells.

Authors:  Robert Besch; Hendrik Poeck; Tobias Hohenauer; Daniela Senft; Georg Häcker; Carola Berking; Veit Hornung; Stefan Endres; Thomas Ruzicka; Simon Rothenfusser; Gunther Hartmann
Journal:  J Clin Invest       Date:  2009-07-20       Impact factor: 14.808

9.  Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus.

Authors:  Martin Schlee; Andreas Roth; Veit Hornung; Cristina Amparo Hagmann; Vera Wimmenauer; Winfried Barchet; Christoph Coch; Markus Janke; Aleksandra Mihailovic; Greg Wardle; Stefan Juranek; Hiroki Kato; Taro Kawai; Hendrik Poeck; Katherine A Fitzgerald; Osamu Takeuchi; Shizuo Akira; Thomas Tuschl; Eicke Latz; Janos Ludwig; Gunther Hartmann
Journal:  Immunity       Date:  2009-07-02       Impact factor: 31.745

10.  RIG-I-like helicases induce immunogenic cell death of pancreatic cancer cells and sensitize tumors toward killing by CD8(+) T cells.

Authors:  P Duewell; A Steger; H Lohr; H Bourhis; H Hoelz; S V Kirchleitner; M R Stieg; S Grassmann; S Kobold; J T Siveke; S Endres; M Schnurr
Journal:  Cell Death Differ       Date:  2014-07-11       Impact factor: 15.828

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  2 in total

Review 1.  RIG-I-Like Receptors as Novel Targets for Pan-Antivirals and Vaccine Adjuvants Against Emerging and Re-Emerging Viral Infections.

Authors:  Hui Yee Yong; Dahai Luo
Journal:  Front Immunol       Date:  2018-06-20       Impact factor: 7.561

Review 2.  Therapeutic Targeting of RIG-I and MDA5 Might Not Lead to the Same Rome.

Authors:  Dacquin M Kasumba; Nathalie Grandvaux
Journal:  Trends Pharmacol Sci       Date:  2018-12-31       Impact factor: 14.819

  2 in total

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