Literature DB >> 29373016

Optogenetic Reconstitution for Determining the Form and Function of Membraneless Organelles.

Elliot Dine1, Jared E Toettcher1.   

Abstract

It has recently become clear that large-scale macromolecular self-assembly is a rule, rather than an exception, of intracellular organization. A growing number of proteins and RNAs have been shown to self-assemble into micrometer-scale clusters that exhibit either liquid-like or gel-like properties. Given their proposed roles in intracellular regulation, embryo development, and human disease, it is becoming increasingly important to understand how these membraneless organelles form and to map their functional consequences for the cell. Recently developed optogenetic systems make it possible to acutely control cluster assembly and disassembly in live cells, driving the separation of proteins of interest into liquid droplets, hydrogels, or solid aggregates. Here we propose that these approaches, as well as their evolution into the next generation of optogenetic biophysical tools, will allow biologists to determine how the self-assembly of membraneless organelles modulates diverse biochemical processes.

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Year:  2018        PMID: 29373016      PMCID: PMC5972035          DOI: 10.1021/acs.biochem.7b01173

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  31 in total

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2.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

Authors:  Yongdae Shin; Joel Berry; Nicole Pannucci; Mikko P Haataja; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2016-12-29       Impact factor: 41.582

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Journal:  Cell       Date:  2017-09-21       Impact factor: 41.582

4.  Intracellular production of hydrogels and synthetic RNA granules by multivalent molecular interactions.

Authors:  Hideki Nakamura; Albert A Lee; Ali Sobhi Afshar; Shigeki Watanabe; Elmer Rho; Shiva Razavi; Allister Suarez; Yu-Chun Lin; Makoto Tanigawa; Brian Huang; Robert DeRose; Diana Bobb; William Hong; Sandra B Gabelli; John Goutsias; Takanari Inoue
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5.  The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo.

Authors:  T Berleth; M Burri; G Thoma; D Bopp; S Richstein; G Frigerio; M Noll; C Nüsslein-Volhard
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6.  Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein.

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Journal:  Mol Cell       Date:  2016-07-07       Impact factor: 17.970

7.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
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Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
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9.  Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.

Authors:  Adam G Larson; Daniel Elnatan; Madeline M Keenen; Michael J Trnka; Jonathan B Johnston; Alma L Burlingame; David A Agard; Sy Redding; Geeta J Narlikar
Journal:  Nature       Date:  2017-06-21       Impact factor: 49.962

10.  Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules.

Authors:  Sonja Kroschwald; Shovamayee Maharana; Daniel Mateju; Liliana Malinovska; Elisabeth Nüske; Ina Poser; Doris Richter; Simon Alberti
Journal:  Elife       Date:  2015-08-04       Impact factor: 8.140

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  2 in total

Review 1.  Harnessing biomolecular condensates in living cells.

Authors:  Hideki Nakamura; Robert DeRose; Takanari Inoue
Journal:  J Biochem       Date:  2019-07-01       Impact factor: 3.387

2.  Positive feedback between the T cell kinase Zap70 and its substrate LAT acts as a clustering-dependent signaling switch.

Authors:  Elliot Dine; Ellen H Reed; Jared E Toettcher
Journal:  Cell Rep       Date:  2021-06-22       Impact factor: 9.423

  2 in total

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