Literature DB >> 29356946

Genetic characterization of Rio de Janeiro for different Y-STR sets.

Juliana Jannuzzi1, Patrícia Domingues2, Filipa Simão2, Anna Carolina da Silva Chaves2, Elizeu Fagundes de Carvalho2, Leonor Gusmão2,3,4.   

Abstract

In this work, the YfilerPlus kit was used to investigate a sample of 258 males from Rio de Janeiro. In addition, the previous database of 760 Yfiler profiles deposited in the YHRD was updated to 1610. YfilerPlus markers showed a high haplotype diversity (0.99997), with only one haplotype shared by two individuals. When only considering the Yfiler markers, the haplotype diversity was slightly lower (0.99976), with 5 haplotypes shared by two individuals and 1 haplotype shared by three individuals. Low genetic distances were found between the Rio de Janeiro and European populations as well as the European/Hispanic American samples.

Keywords:  Admixed population; Brazil; Y-STRs; Yfiler; YfilerPlus

Mesh：

Year:  2018        PMID： 29356946     DOI： 10.1007/s00414-018-1776-x

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN： 0937-9827            Impact factor:   2.686


  7 in total

1.  A new future of forensic Y-chromosome analysis: rapidly mutating Y-STRs for differentiating male relatives and paternal lineages.

Authors:  Kaye N Ballantyne; Victoria Keerl; Andreas Wollstein; Ying Choi; Sofia B Zuniga; Arwin Ralf; Mark Vermeulen; Peter de Knijff; Manfred Kayser
Journal:  Forensic Sci Int Genet       Date:  2011-05-25       Impact factor: 4.882

2.  Male lineage strata of Brazilian population disclosed by the simultaneous analysis of STRs and SNPs.

Authors:  Andréa M Oliveira; Patricia M Domingues; Verónica Gomes; António Amorim; Juliana Jannuzzi; Elizeu F de Carvalho; Leonor Gusmão
Journal:  Forensic Sci Int Genet       Date:  2014-09-08       Impact factor: 4.882

3.  DNA polymorphism detectable by restriction endonucleases.

Authors:  M Nei; F Tajima
Journal:  Genetics       Date:  1981-01       Impact factor: 4.562

4.  Population and mutation analysis of 17 Y-STR loci from Rio de Janeiro (Brazil).

Authors:  Andréa Carla de Souza Góes; Elizeu Fagundes de Carvalho; Iva Gomes; Dayse Aparecida da Silva; Erica Helena Fonseca Gil; António Amorim; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2004-11-24       Impact factor: 2.686

5.  Arlequin (version 3.0): an integrated software package for population genetics data analysis.

Authors:  Laurent Excoffier; Guillaume Laval; Stefan Schneider
Journal:  Evol Bioinform Online       Date:  2007-02-23       Impact factor: 1.625

6.  A global analysis of Y-chromosomal haplotype diversity for 23 STR loci.

Authors:  Josephine Purps; Sabine Siegert; Sascha Willuweit; Marion Nagy; Cíntia Alves; Renato Salazar; Sheila M T Angustia; Lorna H Santos; Katja Anslinger; Birgit Bayer; Qasim Ayub; Wei Wei; Yali Xue; Chris Tyler-Smith; Miriam Baeta Bafalluy; Begoña Martínez-Jarreta; Balazs Egyed; Beate Balitzki; Sibylle Tschumi; David Ballard; Denise Syndercombe Court; Xinia Barrantes; Gerhard Bäßler; Tina Wiest; Burkhard Berger; Harald Niederstätter; Walther Parson; Carey Davis; Bruce Budowle; Helen Burri; Urs Borer; Christoph Koller; Elizeu F Carvalho; Patricia M Domingues; Wafaa Takash Chamoun; Michael D Coble; Carolyn R Hill; Daniel Corach; Mariela Caputo; Maria E D'Amato; Sean Davison; Ronny Decorte; Maarten H D Larmuseau; Claudio Ottoni; Olga Rickards; Di Lu; Chengtao Jiang; Tadeusz Dobosz; Anna Jonkisz; William E Frank; Ivana Furac; Christian Gehrig; Vincent Castella; Branka Grskovic; Cordula Haas; Jana Wobst; Gavrilo Hadzic; Katja Drobnic; Katsuya Honda; Yiping Hou; Di Zhou; Yan Li; Shengping Hu; Shenglan Chen; Uta-Dorothee Immel; Rüdiger Lessig; Zlatko Jakovski; Tanja Ilievska; Anja E Klann; Cristina Cano García; Peter de Knijff; Thirsa Kraaijenbrink; Aikaterini Kondili; Penelope Miniati; Maria Vouropoulou; Lejla Kovacevic; Damir Marjanovic; Iris Lindner; Issam Mansour; Mouayyad Al-Azem; Ansar El Andari; Miguel Marino; Sandra Furfuro; Laura Locarno; Pablo Martín; Gracia M Luque; Antonio Alonso; Luís Souto Miranda; Helena Moreira; Natsuko Mizuno; Yasuki Iwashima; Rodrigo S Moura Neto; Tatiana L S Nogueira; Rosane Silva; Marina Nastainczyk-Wulf; Jeanett Edelmann; Michael Kohl; Shengjie Nie; Xianping Wang; Baowen Cheng; Carolina Núñez; Marian Martínez de Pancorbo; Jill K Olofsson; Niels Morling; Valerio Onofri; Adriano Tagliabracci; Horolma Pamjav; Antonia Volgyi; Gusztav Barany; Ryszard Pawlowski; Agnieszka Maciejewska; Susi Pelotti; Witold Pepinski; Monica Abreu-Glowacka; Christopher Phillips; Jorge Cárdenas; Danel Rey-Gonzalez; Antonio Salas; Francesca Brisighelli; Cristian Capelli; Ulises Toscanini; Andrea Piccinini; Marilidia Piglionica; Stefania L Baldassarra; Rafal Ploski; Magdalena Konarzewska; Emila Jastrzebska; Carlo Robino; Antti Sajantila; Jukka U Palo; Evelyn Guevara; Jazelyn Salvador; Maria Corazon De Ungria; Jae Joseph Russell Rodriguez; Ulrike Schmidt; Nicola Schlauderer; Pekka Saukko; Peter M Schneider; Miriam Sirker; Kyoung-Jin Shin; Yu Na Oh; Iulia Skitsa; Alexandra Ampati; Tobi-Gail Smith; Lina Solis de Calvit; Vlastimil Stenzl; Thomas Capal; Andreas Tillmar; Helena Nilsson; Stefania Turrina; Domenico De Leo; Andrea Verzeletti; Venusia Cortellini; Jon H Wetton; Gareth M Gwynne; Mark A Jobling; Martin R Whittle; Denilce R Sumita; Paulina Wolańska-Nowak; Rita Y Y Yong; Michael Krawczak; Michael Nothnagel; Lutz Roewer
Journal:  Forensic Sci Int Genet       Date:  2014-04-28       Impact factor: 4.882

7.  Toward male individualization with rapidly mutating y-chromosomal short tandem repeats.

Authors:  Kaye N Ballantyne; Arwin Ralf; Rachid Aboukhalid; Niaz M Achakzai; Maria J Anjos; Qasim Ayub; Jože Balažic; Jack Ballantyne; David J Ballard; Burkhard Berger; Cecilia Bobillo; Mehdi Bouabdellah; Helen Burri; Tomas Capal; Stefano Caratti; Jorge Cárdenas; François Cartault; Elizeu F Carvalho; Monica Carvalho; Baowen Cheng; Michael D Coble; David Comas; Daniel Corach; Maria E D'Amato; Sean Davison; Peter de Knijff; Maria Corazon A De Ungria; Ronny Decorte; Tadeusz Dobosz; Berit M Dupuy; Samir Elmrghni; Mateusz Gliwiński; Sara C Gomes; Laurens Grol; Cordula Haas; Erin Hanson; Jürgen Henke; Lotte Henke; Fabiola Herrera-Rodríguez; Carolyn R Hill; Gunilla Holmlund; Katsuya Honda; Uta-Dorothee Immel; Shota Inokuchi; Mark A Jobling; Mahmoud Kaddura; Jong S Kim; Soon H Kim; Wook Kim; Turi E King; Eva Klausriegler; Daniel Kling; Lejla Kovačević; Leda Kovatsi; Paweł Krajewski; Sergey Kravchenko; Maarten H D Larmuseau; Eun Young Lee; Ruediger Lessig; Ludmila A Livshits; Damir Marjanović; Marek Minarik; Natsuko Mizuno; Helena Moreira; Niels Morling; Meeta Mukherjee; Patrick Munier; Javaregowda Nagaraju; Franz Neuhuber; Shengjie Nie; Premlaphat Nilasitsataporn; Takeki Nishi; Hye H Oh; Jill Olofsson; Valerio Onofri; Jukka U Palo; Horolma Pamjav; Walther Parson; Michal Petlach; Christopher Phillips; Rafal Ploski; Samayamantri P R Prasad; Dragan Primorac; Gludhug A Purnomo; Josephine Purps; Hector Rangel-Villalobos; Krzysztof Rębała; Budsaba Rerkamnuaychoke; Danel Rey Gonzalez; Carlo Robino; Lutz Roewer; Alexandra Rosa; Antti Sajantila; Andrea Sala; Jazelyn M Salvador; Paula Sanz; Cornelia Schmitt; Anil K Sharma; Dayse A Silva; Kyoung-Jin Shin; Titia Sijen; Miriam Sirker; Daniela Siváková; Vedrana Skaro; Carlos Solano-Matamoros; Luis Souto; Vlastimil Stenzl; Herawati Sudoyo; Denise Syndercombe-Court; Adriano Tagliabracci; Duncan Taylor; Andreas Tillmar; Iosif S Tsybovsky; Chris Tyler-Smith; Kristiaan J van der Gaag; Daniel Vanek; Antónia Völgyi; Denise Ward; Patricia Willemse; Eric P H Yap; Rita Y Y Yong; Irena Zupanič Pajnič; Manfred Kayser
Journal:  Hum Mutat       Date:  2014-07-14       Impact factor: 4.878
  7 in total

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