Literature DB >> 29341462

DNA Origami Scaffolds as Templates for Functional Tetrameric Kir3 K+ Channels.

Tatsuki Kurokawa1,2, Shigeki Kiyonaka1,2,3, Eiji Nakata2,4, Masayuki Endo2,5, Shohei Koyama1, Emiko Mori1,2, Nam Ha Tran3, Huyen Dinh4, Yuki Suzuki2,6, Kumi Hidaka6, Masaaki Kawata7, Chikara Sato7, Hiroshi Sugiyama2,5,6, Takashi Morii2,4, Yasuo Mori1,2,3,5.   

Abstract

In native systems, scaffolding proteins play important roles in assembling proteins into complexes to transduce signals. This concept is yet to be applied to the assembly of functional transmembrane protein complexes in artificial systems. To address this issue, DNA origami has the potential to serve as scaffolds that arrange proteins at specific positions in complexes. Herein, we report that Kir3 K+ channel proteins are assembled through zinc-finger protein (ZFP)-adaptors at specific locations on DNA origami scaffolds. Specific binding of the ZFP-fused Kir3 channels and ZFP-based adaptors on DNA origami were confirmed by atomic force microscopy and gel electrophoresis. Furthermore, the DNA origami with ZFP binding sites nearly tripled the K+ channel current activity elicited by heterotetrameric Kir3 channels in HEK293T cells. Thus, our method provides a useful template to control the oligomerization states of membrane protein complexes in vitro and in living cells.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA origami; DNA structures; biosensors; ion channels; scaffolds

Year:  2018        PMID: 29341462     DOI: 10.1002/anie.201709982

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  6 in total

1.  Programmable Nanodisc Patterning by DNA Origami.

Authors:  Zhao Zhang; Edwin R Chapman
Journal:  Nano Lett       Date:  2020-07-15       Impact factor: 11.189

2.  Accessing and Assessing the Cell-Surface Glycocalyx Using DNA Origami.

Authors:  Piyumi Wijesekara; Ying Liu; Weitao Wang; Elizabeth K Johnston; Mara L G Sullivan; Rebecca E Taylor; Xi Ren
Journal:  Nano Lett       Date:  2021-05-24       Impact factor: 11.189

Review 3.  Emerging applications at the interface of DNA nanotechnology and cellular membranes: Perspectives from biology, engineering, and physics.

Authors:  Weitao Wang; D Sebastian Arias; Markus Deserno; Xi Ren; Rebecca E Taylor
Journal:  APL Bioeng       Date:  2020-12-08

Review 4.  Surface Assembly of DNA Origami on a Lipid Bilayer Observed Using High-Speed Atomic Force Microscopy.

Authors:  Masayuki Endo
Journal:  Molecules       Date:  2022-06-30       Impact factor: 4.927

5.  Programmed catalysis within stimuli-responsive mechanically unlocked nanocavities in DNA origami tiles.

Authors:  Jianbang Wang; Zhixin Zhou; Zhenzhen Li; Itamar Willner
Journal:  Chem Sci       Date:  2020-10-27       Impact factor: 9.825

6.  Rational design of a DNA sequence-specific modular protein tag by tuning the alkylation kinetics.

Authors:  Thang Minh Nguyen; Eiji Nakata; Zhengxiao Zhang; Masayuki Saimura; Huyen Dinh; Takashi Morii
Journal:  Chem Sci       Date:  2019-08-20       Impact factor: 9.825

  6 in total

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