| Literature DB >> 29339699 |
Xiaofeng Xu, Yirun Li, Yi Huang, Huadan Ye, Liyuan Han, Huihui Ji, Xiaoyin Chen, Nan Wu, Danjie Jiang, Limin Xu, Dongjun Dai, Shiwei Duan, Xiaomin Chen1.
Abstract
OBJECTIVE: Coronary heart disease (CHD) is the most common cause of death worldwide. This study aimed to validate the association of the rs964184 polymorphism with the CHD risk and included 874 CHD patients and 776 controls.Entities:
Mesh:
Substances:
Year: 2018 PMID: 29339699 PMCID: PMC5864789 DOI: 10.14744/AnatolJCardiol.2017.8002
Source DB: PubMed Journal: Anatol J Cardiol ISSN: 2149-2263 Impact factor: 1.596
Genotype and allele distribution of rs964184*
| Gender | Group | Genotype (counts) | X2 | P (df=2) | HWE | Allele (n,%) | X2 | P (df=1) | OR (95% CI) | Power | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | GC | CC | G | C | ||||||||||
| All | Cases | |||||||||||||
| (n=874) | 56 | 341 | 477 | 0.724 | 453 (25.9) | 1295 (74.1) | ||||||||
| Controls | ||||||||||||||
| (n=776) | 32 | 252 | 492 | 14.365 | 0.001 | 1.000 | 316 (20.4) | 1236 (79.6) | 14.191 | 1.67’10–4 | 1.368 (1.162 -1.611) | 0.965 | ||
| Males | Cases | |||||||||||||
| (n=625) | 40 | 238 | 347 | 1.000 | 318 (25.4) | 932 (74.6) | ||||||||
| Controls | ||||||||||||||
| (n=424) | 15 | 130 | 279 | 12.387 | 0.002 | 1.000 | 160 (18.9) | 688 (81.1) | 12.404 | 4.32’10–4 | 1.467 (1.185-1.817) | 0.945 | ||
| Females | Cases | |||||||||||||
| (n=249) | 16 | 103 | 130 | 0.523 | 135 (27.1) | 363 (72.9) | ||||||||
| Controls | ||||||||||||||
| (n=352) | 17 | 122 | 213 | 4.190 | 0.123 | 1.000 | 156 (22.2) | 548 (77.8) | 3.894 | 0.049 | 1.306 (1.001-1.704) | 0.504 | ||
P value less than or equal to 0.05 is in bold. 95%CI-95% confidence interval; HWE-hardy Weinberg equilibrium; OR-odds ratio
Genetic testing under the dominant and recessive models*
| Gender | Group | Dominant | X2 | OR (95% CI) | Power | Recessive | X2 | OR (95% CI) | Power | ||
|---|---|---|---|---|---|---|---|---|---|---|---|
| GG+GC CC | GG GC+CC | ||||||||||
| All | Cases | ||||||||||
| (n=874) | 397 477 | 56 818 | |||||||||
| Controls | |||||||||||
| (n=776) | 284 492 | 13.209 | 2.81’10–4 | 1.442 (1.183-1.757) | 0.999 | 32 744 | 4.246 | 0.039 | 1.592 (1.019-2.485) | 0.787 | |
| Males | Cases | ||||||||||
| (n=625) | 278 347 | 40 585 | |||||||||
| Controls | |||||||||||
| (n=424) | 145 279 | 11.098 | 0.001 | 1.542 (1.194-1.990) | 0.997 | 15 409 | 4.166 | 0.041 | 1.864 (1.016-3.420) | 0.670 | |
| Females | Cases | ||||||||||
| (n=249) | 119 130 | 16 233 | |||||||||
| Controls | |||||||||||
| (n=352) | 139 213 | 4.103 | 0.043 | 1.403 (1.011-1.947) | 0.817 | 17 335 | 0.716 | 0.397 | 1.353 (0.670-2.733) | 0.300 |
P value less than or equal to 0.05 is in bold. 95%CI-95% confidence interval; OR - odds ratio
Comparison of genotype and allele frequencies between cases and controls by age*
| Age | Group | Genotype(counts) | X2 | HWE | Allele (n,%) | X2 | OR (95% CI) | Power | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | GC | CC | G | C | |||||||||
| 55< | Cases | ||||||||||||
| (n=186) | 7 | 70 | 109 | 0.404 | 84 (22.6) | 288 (77.4) | |||||||
| Controls (n=236) | 10 | 77 | 149 | 1.156 | 0.561 | 1.000 | 97 (20.6) | 375 (79.4) | 0.509 | 0.476 | 1.128 (0.811-1.569) | 0.111 | |
| 55-65 | Cases | ||||||||||||
| (n=361) | 27 | 149 | 185 | 0.796 | 203 (28.1) | 519 (71.9) | |||||||
| Controls (n=357) | 15 | 125 | 217 | 8.056 | 0.018 | 0.641 | 155 (21.7) | 559 (78.3) | 7.876 | 0.005 | 1.411 (1.109-1.795) | 0.803 | |
| >65 | Cases | ||||||||||||
| (n=327) | 22 | 122 | 183 | 0.768 | 166 (25.4) | 488 (74.6) | |||||||
| Controls (N=183) | 7 | 50 | 126 | 8.426 | 0.015 | 0.446 | 64 (17.5) | 302 (82.5) | 8.377 | 0.004 | 1.605 (1.163-2.215) | 0.835 | |
P value less than or equal to 0.05 is in bold. 95%CI-95% confidence interval; HWE-Hardy Weinberg equilibrium; OR-odds ratio
Comparison of genotype and allele frequencies between cases and controls by age as well as gender*
| Age | Gender | Group | Genotype (counts) | X2 | HWE | Allele (n,%) | X2 | OR (95%CI) | Power | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | GC | CC | G | C | ||||||||||
| 55< | Males | Cases | ||||||||||||
| (n=149) | 7 | 60 | 82 | 0.511 | 74 (24.8) | 224 (75.2) | ||||||||
| Controls | ||||||||||||||
| (n=159) | 5 | 53 | 101 | 2.418 | 0.299 | 0.802 | 63 (19.8) | 255 (80.2) | 2.242 | 0.134 | 1.337 (0.914-1.957) | 0.562 | ||
| Females | Cases | |||||||||||||
| (n=37) | 0 | 10 | 27 | 1.000 | 10 (13.5) | 64 (86.5) | ||||||||
| Controls | ||||||||||||||
| (n=77) | 5 | 24 | 48 | 2.976 | 0.226 | 0.504 | 34 (22.1) | 120 (77.9) | 2.354 | 0.125 | 0.552 (0.256-1.188) | 0.588 | ||
| 55-65 | Males | Cases | ||||||||||||
| (n=262) | 22 | 103 | 137 | 0.648 | 147 (28.1) | 377 (71.9) | ||||||||
| Controls | ||||||||||||||
| (n=172) | 5 | 54 | 113 | 10.070 | 0.007 | 0.803 | 64 (18.6) | 280 (81.4) | 10.077 | 0.002 | 1.706 (1.224-2.377) | 0.996 | ||
| Females | Cases | |||||||||||||
| (n=99) | 5 | 46 | 48 | 0.215 | 56 (28.3) | 142 (71.7) | ||||||||
| Controls | ||||||||||||||
| (n=185) | 10 | 71 | 104 | 1.759 | 0.415 | 0.842 | 91 (24.6) | 279 (75.4) | 0.915 | 0.339 | 1.209 (0.819-1.785) | 0.275 | ||
| >65 | Males | Cases | ||||||||||||
| (n=214) | 11 | 75 | 128 | 1.000 | 97 (22.7) | 331 (77.3) | ||||||||
| Controls | ||||||||||||||
| (n=93) | 5 | 23 | 65 | 3.216 | 0.200 | 0.151 | 33 (17.7) | 153 (82.3) | 1.882 | 0.170 | 1.359 (0.876-2.108) | 0.492 | ||
| Females | Cases | |||||||||||||
| (n=113) | 11 | 47 | 55 | 0.826 | 69 (30.5) | 157 (69.4) | ||||||||
| Controls | ||||||||||||||
| (n=90) | 2 | 27 | 61 | 9.462 | 0.009 | 1.000 | 31(17.2) | 149(82.8) | 9.560 | 0.002 | 2.112 (1.308-3.412) | 0.994 | ||
P value less than or equal to 0.05 is in bold. 95%CI-95% confidence interval; HWE-Hardy Weinberg equilibrium; OR-odds ratio
Genetic testing under the dominant and recessive models by age and gender*
| Age | Gender | Group | Dominant | X2 | Power | OR (95%CI) | Recessive | X2 | OR (95%CI) | Power | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rs964184 | GG+GC CC | GG GC+CC | ||||||||||
| Males | Cases | |||||||||||
| (n=149) | 67 82 | 7 142 | ||||||||||
| 55< | Controls | |||||||||||
| (n=159) | 58 101 | 2.298 | 0.130 | 0.573 | 1.423 (0.901-2.246) | 5 154 | 0.496 | 0.481 | 1.518 (0.471-4.892) | 0.170 | ||
| Females | Cases | |||||||||||
| (n=37) | 10 27 | 0 37 | ||||||||||
| Controls | ||||||||||||
| (n=77) | 29 48 | 1.256 | 0.262 | 0.349 | 0.613 (0.260-1.448) | 5 72 | 2.513 | 0.113 | NA | NA | ||
| 55-65 | Males | Cases | ||||||||||
| (n=262) | 125 137 | 22 240 | ||||||||||
| Controls | ||||||||||||
| (n=172) | 59 113 | 7.643 | 0.006 | 0.977 | 1.748 (1.175-2.600) | 5 167 | 5.364 | 0.021 | 3.062 (1.137-8.247) | 0.928 | ||
| Females | Cases | |||||||||||
| (n=99) | 51 48 | 5 94 | ||||||||||
| Controls | ||||||||||||
| (n=185) | 81 104 | 1.550 | 0.213 | 0.421 | 1.364 (0.836-2.226) | 10 175 | 0.016 | 0.899 | 0.931 (0.309-2.803) | 0.051 | ||
| >65 | Males | Cases | ||||||||||
| (n=214) | 86 128 | 11 203 | ||||||||||
| Controls | ||||||||||||
| (n=93) | 28 65 | 2.821 | 0.093 | 0.666 | 1.560 (0.927-2.625) | 5 88 | 0.007 | 0.932 | 0.954 (0.322-2.826) | 0.054 | ||
| Females | Cases | |||||||||||
| (n=113) | 58 55 | 11 102 | ||||||||||
| Controls | ||||||||||||
| (n=90) | 29 61 | 7.467 | 0.006 | 0.975 | 2.218 (1.247-3.945) | 2 88 | 4.717 | 0.030 | 4.745 (1.024-21.989) | 0.886 |
P value less than or equal to 0.05 is in bold. NA-not applicable. 95%CI-95% confidence interval; OR-odds ratio
Figure 1Correlation between TG levels and rs964184 genotypes*
*: indicates that cigarette smokers were excluded. TG – triglyceride
Figure 2Breakdown correlation between TG levels and age by gender in the patients and controls
A-Correlation between TG levels and age in the subgroups of the patients and controls; B-Correlation between TG levels and age in the subgroup of male and female patients. TG - triglyceride