Literature DB >> 29335636

Saving seed microbiomes.

Gabriele Berg1, Jos M Raaijmakers2.   

Abstract

Plant seeds are home to diverse microbial communities whose composition is determined by plant genotype, environment, and management practices. Plant domestication is now recognized as an important driver of plant-associated microbial diversity. To what extent and how domestication affects seed microbiomes is less well studied. Here we propose a 'back-to-the-future' approach to harness seed microbiomes of wild relatives of crop cultivars to save and re-instate missing beneficial seed microbes for improved plant tolerance to biotic and abiotic stress.

Mesh:

Year:  2018        PMID: 29335636      PMCID: PMC5931960          DOI: 10.1038/s41396-017-0028-2

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  18 in total

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Authors:  Diana H Wall; Uffe N Nielsen; Johan Six
Journal:  Nature       Date:  2015-11-23       Impact factor: 49.962

Review 2.  The nature of selection during plant domestication.

Authors:  Michael D Purugganan; Dorian Q Fuller
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

3.  Cross-kingdom similarities in microbiome functions.

Authors:  Rodrigo Mendes; Jos M Raaijmakers
Journal:  ISME J       Date:  2015-02-03       Impact factor: 10.302

4.  A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment.

Authors:  Marcel G A van der Heijden; Susanne de Bruin; Ludo Luckerhoff; Richard S P van Logtestijn; Klaus Schlaeppi
Journal:  ISME J       Date:  2015-07-14       Impact factor: 10.302

Review 5.  Ecological patterns of seed microbiome diversity, transmission, and assembly.

Authors:  Ashley Shade; Marie-Agnès Jacques; Matthieu Barret
Journal:  Curr Opin Microbiol       Date:  2017-04-21       Impact factor: 7.934

6.  ECOLOGY. Soil immune responses.

Authors:  Jos M Raaijmakers; Mark Mazzola
Journal:  Science       Date:  2016-06-17       Impact factor: 47.728

7.  An obesity-associated gut microbiome with increased capacity for energy harvest.

Authors:  Peter J Turnbaugh; Ruth E Ley; Michael A Mahowald; Vincent Magrini; Elaine R Mardis; Jeffrey I Gordon
Journal:  Nature       Date:  2006-12-21       Impact factor: 49.962

Review 8.  Plant microbial diversity is suggested as the key to future biocontrol and health trends.

Authors:  Gabriele Berg; Martina Köberl; Daria Rybakova; Henry Müller; Rita Grosch; Kornelia Smalla
Journal:  FEMS Microbiol Ecol       Date:  2017-05-01       Impact factor: 4.194

9.  Conservation and diversity of seed associated endophytes in Zea across boundaries of evolution, ethnography and ecology.

Authors:  David Johnston-Monje; Manish N Raizada
Journal:  PLoS One       Date:  2011-06-03       Impact factor: 3.240

10.  A New Approach to Modify Plant Microbiomes and Traits by Introducing Beneficial Bacteria at Flowering into Progeny Seeds.

Authors:  Birgit Mitter; Nikolaus Pfaffenbichler; Richard Flavell; Stéphane Compant; Livio Antonielli; Alexandra Petric; Teresa Berninger; Muhammad Naveed; Raheleh Sheibani-Tezerji; Geoffrey von Maltzahn; Angela Sessitsch
Journal:  Front Microbiol       Date:  2017-01-23       Impact factor: 5.640

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  39 in total

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Journal:  Nat Plants       Date:  2021-01-04       Impact factor: 15.793

2.  Metagenomics of two gnotobiotically grown aromatic rice cultivars reveals genotype-dependent and tissue-specific colonization of endophytic bacterial communities attributing multiple plant growth promoting traits.

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Journal:  World J Microbiol Biotechnol       Date:  2021-03-04       Impact factor: 3.312

3.  Visualizing the invisible: class excursions to ignite children's enthusiasm for microbes.

Authors:  Terry J McGenity; Amare Gessesse; John E Hallsworth; Esther Garcia Cela; Carol Verheecke-Vaessen; Fengping Wang; Max Chavarría; Max M Haggblom; Søren Molin; Antoine Danchin; Eddy J Smid; Cédric Lood; Charles S Cockell; Corinne Whitby; Shuang-Jiang Liu; Nancy P Keller; Lisa Y Stein; Seth R Bordenstein; Rup Lal; Olga C Nunes; Lone Gram; Brajesh K Singh; Nicole S Webster; Cindy Morris; Sharon Sivinski; Saskia Bindschedler; Pilar Junier; André Antunes; Bonnie K Baxter; Paola Scavone; Kenneth Timmis
Journal:  Microb Biotechnol       Date:  2020-05-14       Impact factor: 5.813

4.  Metadata harmonization-Standards are the key for a better usage of omics data for integrative microbiome analysis.

Authors:  Tomislav Cernava; Daria Rybakova; Michael Schloter; Gabriele Berg; François Buscot; Thomas Clavel; Alice Carolyn McHardy; Fernando Meyer; Folker Meyer; Jörg Overmann; Bärbel Stecher; Angela Sessitsch
Journal:  Environ Microbiome       Date:  2022-06-24

5.  All Set before Flowering: A 16S Gene Amplicon-Based Analysis of the Root Microbiome Recruited by Common Bean (Phaseolus vulgaris) in Its Centre of Domestication.

Authors:  Francisco Medina-Paz; Luis Herrera-Estrella; Martin Heil
Journal:  Plants (Basel)       Date:  2022-06-21

6.  The contribution of plant microbiota to economy growth.

Authors:  Angela Sessitsch; Günter Brader; Nikolaus Pfaffenbichler; Doris Gusenbauer; Birgit Mitter
Journal:  Microb Biotechnol       Date:  2018-06-21       Impact factor: 5.813

7.  Rhizosheath microbial community assembly of sympatric desert speargrasses is independent of the plant host.

Authors:  Ramona Marasco; María J Mosqueira; Marco Fusi; Jean-Baptiste Ramond; Giuseppe Merlino; Jenny M Booth; Gillian Maggs-Kölling; Don A Cowan; Daniele Daffonchio
Journal:  Microbiome       Date:  2018-12-04       Impact factor: 14.650

8.  Domestication affects the composition, diversity, and co-occurrence of the cereal seed microbiota.

Authors:  Yulduzkhon Abdullaeva; Binoy Ambika Manirajan; Bernd Honermeier; Sylvia Schnell; Massimiliano Cardinale
Journal:  J Adv Res       Date:  2020-12-17       Impact factor: 10.479

9.  Spatio-Temporal and Cultivar-Dependent Variations in the Cannabis Microbiome.

Authors:  Dominique Comeau; Amy Novinscak; David L Joly; Martin Filion
Journal:  Front Microbiol       Date:  2020-03-24       Impact factor: 5.640

10.  Roots and Panicles of the C4 Model Grasses Setaria viridis (L). and S. pumila Host Distinct Bacterial Assemblages With Core Taxa Conserved Across Host Genotypes and Sampling Sites.

Authors:  Carolina Escobar Rodríguez; Birgit Mitter; Livio Antonielli; Friederike Trognitz; Stéphane Compant; Angela Sessitsch
Journal:  Front Microbiol       Date:  2018-11-12       Impact factor: 5.640

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