Literature DB >> 29329714

Mutation burden profile in familial Alzheimer's disease cases from India.

Adhikarla Syama1, Somdatta Sen2, Lakshmi Narayanan Kota2, Biju Viswanath2, Meera Purushottam2, Mathew Varghese2, Sanjeev Jain2, Mitradas M Panicker3, Odity Mukherjee4.   

Abstract

This study attempts to identify coding risk variants in genes previously implicated in Alzheimer's disease (AD) pathways, through whole-exome sequencing of subjects (N = 17) with AD, with a positive family history of dementia (familial AD). We attempted to evaluate the mutation burden in genes encoding amyloid precursor protein metabolism and previously linked to risk of dementias. Novel variants were identified in genes involved in amyloid precursor protein metabolism such as PSEN1 (chr 14:73653575, W161C, tgg > tgT), PLAT (chr 8:42039530,G272R), and SORL1 (chr11:121414373,G601D). The mutation burden assessment of dementia-related genes for all 17 cases revealed 45 variants, which were either shared across subjects, or were present in just the 1 patient. The study shows that the clinical characteristics, and genetic correlates, obtained in this sample are broadly comparable to the other studies that have investigated familial forms of AD. Our study identifies rare deleterious genetic variations, in the coding region of genes involved in amyloid signaling, and other dementia-associated pathways.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Alzheimer's disease; Clinical symptoms; Coding variation; Mutation burden; Whole-exome sequencing

Mesh:

Substances:

Year:  2017        PMID: 29329714     DOI: 10.1016/j.neurobiolaging.2017.12.002

Source DB:  PubMed          Journal:  Neurobiol Aging        ISSN: 0197-4580            Impact factor:   4.673


  4 in total

1.  A pathogenic PSEN1 Trp165Cys mutation associated with early-onset Alzheimer's disease.

Authors:  Vo Van Giau; Jung-Min Pyun; Jeewon Suh; Eva Bagyinszky; Seong Soo A An; Sang Yun Kim
Journal:  BMC Neurol       Date:  2019-08-07       Impact factor: 2.474

2.  APP, PSEN1, and PSEN2 Mutations in Asian Patients with Early-Onset Alzheimer Disease.

Authors:  Vo Van Giau; Eva Bagyinszky; Young Chul Youn; Seong Soo A An; SangYun Kim
Journal:  Int J Mol Sci       Date:  2019-09-25       Impact factor: 5.923

3.  Confirming Pathogenicity of the F386L PSEN1 Variant in a South Asian Family With Early-Onset Alzheimer Disease.

Authors:  Sarah J Eger; Yann Le Guen; Raiyan R Khan; Jacob N Hall; Gabriel Kennedy; Greg Zaharchuk; Julien Couthouis; William S Brooks; Dennis Velakoulis; Valerio Napolioni; Michaël E Belloy; Clifton L Dalgard; Elizabeth C Mormino; Aaron D Gitler; Michael D Greicius
Journal:  Neurol Genet       Date:  2021-12-07

4.  Genome analysis and knowledge-driven variant interpretation with TGex.

Authors:  Dvir Dahary; Yaron Golan; Yaron Mazor; Ofer Zelig; Ruth Barshir; Michal Twik; Tsippi Iny Stein; Guy Rosner; Revital Kariv; Fei Chen; Qiang Zhang; Yiping Shen; Marilyn Safran; Doron Lancet; Simon Fishilevich
Journal:  BMC Med Genomics       Date:  2019-12-30       Impact factor: 3.063

  4 in total

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