Literature DB >> 29327921

The Nature and Reactivity of Ferryl Heme in Compounds I and II.

Peter C E Moody1, Emma L Raven2.   

Abstract

Aerobic organisms have evolved to activate oxygen from the atmosphere, which allows them to catalyze the oxidation of different kinds of substrates. This activation of oxygen is achieved by a metal center (usually iron or copper) buried within a metalloprotein. In the case of iron-containing heme enzymes, the activation of oxygen is achieved by formation of transient iron-oxo (ferryl) intermediates; these intermediates are called Compound I and Compound II. The Compound I and II intermediates were first discovered in the 1930s in horseradish peroxidase, and it is now known that these same species are used across the family of heme enzymes, which include all of the peroxidases, the heme catalases, the P450s, cytochrome c oxidase, and NO synthase. Many years have passed since the first observations, but establishing the chemical nature of these transient ferryl species remains a fundamental question that is relevant to the reactivity, and therefore the usefulness, of these species in biology. This Account summarizes experiments that were conceived and conducted at Leicester and presents our ideas on the chemical nature, stability, and reactivity of these ferryl heme species. We begin by briefly summarizing the early milestones in the field, from the 1940s and 1950s. We present comparisons between the nature and reactivity of the ferryl species in horseradish peroxidase, cytochrome c peroxidase, and ascorbate peroxidase; and we consider different modes of electron delivery to ferryl heme, from different substrates in different peroxidases. We address the question of whether the ferryl heme is best formulated as an (unprotonated) FeIV═O or as a (protonated) FeIV-OH species. A range of spectroscopic approaches (EXAFS, resonance Raman, Mossbauer, and EPR) have been used over many decades to examine this question, and in the last ten years, X-ray crystallography has also been employed. We describe how information from all of these studies has blended together to create an overall picture, and how the recent application of neutron crystallography has directly identified protonation states and has helped to clarify the precise nature of the ferryl heme in cytochrome c peroxidase and ascorbate peroxidase. We draw comparisons between the Compound I and Compound II species that we have observed in peroxidases with those found in other heme systems, notably the P450s, highlighting possible commonality across these heme ferryl systems. The identification of proton locations from neutron structures of these ferryl species opens the door for understanding the proton translocations that need to occur during O-O bond cleavage.

Entities:  

Year:  2018        PMID: 29327921     DOI: 10.1021/acs.accounts.7b00463

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  22 in total

1.  Triazine Probes Target Ascorbate Peroxidases in Plants.

Authors:  Kyoko Morimoto; Kyle S Cole; Jiorgos Kourelis; Collin H Witt; Daniel Brown; Daniel Krahn; Monika Stegmann; Farnusch Kaschani; Markus Kaiser; Jonathan Burton; Shabaz Mohammed; Kazuko Yamaguchi-Shinozaki; Eranthie Weerapana; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2019-05-28       Impact factor: 8.340

2.  Visualizing the protons in a metalloenzyme electron proton transfer pathway.

Authors:  Hanna Kwon; Jaswir Basran; Juliette M Devos; Reynier Suardíaz; Marc W van der Kamp; Adrian J Mulholland; Tobias E Schrader; Andreas Ostermann; Matthew P Blakeley; Peter C E Moody; Emma L Raven
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-09       Impact factor: 11.205

3.  Enhanced Rates of C-H Bond Cleavage by a Hydrogen-Bonded Synthetic Heme High-Valent Iron(IV) Oxo Complex.

Authors:  Melanie A Ehudin; David A Quist; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2019-08-02       Impact factor: 15.419

4.  Tuning the Geometric and Electronic Structure of Synthetic High-Valent Heme Iron(IV)-Oxo Models in the Presence of a Lewis Acid and Various Axial Ligands.

Authors:  Melanie A Ehudin; Leland B Gee; Sinan Sabuncu; Augustin Braun; Pierre Moënne-Loccoz; Britt Hedman; Keith O Hodgson; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2019-03-29       Impact factor: 15.419

5.  Effects of Noncovalent Interactions on High-Spin Fe(IV)-Oxido Complexes.

Authors:  Victoria F Oswald; Justin L Lee; Saborni Biswas; Andrew C Weitz; Kaustuv Mittra; Ruixi Fan; Jikun Li; Jiyong Zhao; Michael Y Hu; Esen E Alp; Emile L Bominaar; Yisong Guo; Michael T Green; Michael P Hendrich; A S Borovik
Journal:  J Am Chem Soc       Date:  2020-06-24       Impact factor: 15.419

Review 6.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

7.  Ascorbate Peroxidase Compound II Is an Iron(IV) Oxo Species.

Authors:  Aaron P Ledray; Courtney M Krest; Timothy H Yosca; Kaustuv Mittra; Michael T Green
Journal:  J Am Chem Soc       Date:  2020-11-10       Impact factor: 15.419

Review 8.  New-to-nature chemistry from old protein machinery: carbene and nitrene transferases.

Authors:  Zhen Liu; Frances H Arnold
Journal:  Curr Opin Biotechnol       Date:  2020-12-25       Impact factor: 10.279

9.  Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form.

Authors:  Micah T Nelp; Patrick A Kates; John T Hunt; John A Newitt; Aaron Balog; Derrick Maley; Xiao Zhu; Lynn Abell; Alban Allentoff; Robert Borzilleri; Hal A Lewis; Zeyu Lin; Steven P Seitz; Chunhong Yan; John T Groves
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-12       Impact factor: 11.205

10.  Rewiring the "Push-Pull" Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code.

Authors:  Mary Ortmayer; Karl Fisher; Jaswir Basran; Emmanuel M Wolde-Michael; Derren J Heyes; Colin Levy; Sarah L Lovelock; J L Ross Anderson; Emma L Raven; Sam Hay; Stephen E J Rigby; Anthony P Green
Journal:  ACS Catal       Date:  2020-01-29       Impact factor: 13.084

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