Literature DB >> 29323432

Orthogonal 19 F-Labeling for Solid-State NMR Spectroscopy Reveals the Conformation and Orientation of Short Peptaibols in Membranes.

Stephan L Grage1, Sezgin Kara2, Andrea Bordessa3, Véronique Doan3, Fabio Rizzolo3,4, Marina Putzu5, Tomáš Kubař5, Anna Maria Papini3,4, Grégory Chaume3, Thierry Brigaud3, Sergii Afonin1, Anne S Ulrich1,2.   

Abstract

Peptaibols are promising drug candidates in view of their interference with cellular membranes. Knowledge of their lipid interactions and membrane-bound structure is needed to understand their activity and should be, in principle, accessible by solid-state NMR spectroscopy. However, their unusual amino acid composition and noncanonical conformations make it very challenging to find suitable labels for NMR spectroscopy. Particularly in the case of short sequences, new strategies are required to maximize the structural information that can be obtained from each label. Herein, l-3-(trifluoromethyl)bicyclopent[1.1.1]-1-ylglycine, (R)- and (S)-trifluoromethylalanine, and 15 N-backbone labels, each probing a different direction in the molecule, have been combined to elucidate the conformation and membrane alignment of harzianin HK-VI. For the short sequence of 11 amino acids, 12 orientational constraints have been obtained by using 19 F and 15 N NMR spectroscopy. This strategy revealed a β-bend ribbon structure, which becomes realigned in the membrane from a surface-parallel state towards a membrane-spanning state, with increasing positive spontaneous curvature of the lipids.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  NMR spectroscopy; amino acids; fluorine; isotopic labeling; peptides

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Year:  2018        PMID: 29323432     DOI: 10.1002/chem.201704307

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  2 in total

1.  Trifluoromethylated proline analogues as efficient tools to enhance the hydrophobicity and to promote passive diffusion transport of the l-prolyl-l-leucyl glycinamide (PLG) tripeptide.

Authors:  Martin Oliver; Charlène Gadais; Júlia García-Pindado; Meritxell Teixidó; Nathalie Lensen; Grégory Chaume; Thierry Brigaud
Journal:  RSC Adv       Date:  2018-04-18       Impact factor: 4.036

2.  Monitoring the Site-Specific Solid-State NMR Data in Oligopeptides.

Authors:  Jiří Czernek; Jiří Brus
Journal:  Int J Mol Sci       Date:  2020-04-13       Impact factor: 5.923

  2 in total

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