| Literature DB >> 29323432 |
Stephan L Grage1, Sezgin Kara2, Andrea Bordessa3, Véronique Doan3, Fabio Rizzolo3,4, Marina Putzu5, Tomáš Kubař5, Anna Maria Papini3,4, Grégory Chaume3, Thierry Brigaud3, Sergii Afonin1, Anne S Ulrich1,2.
Abstract
Peptaibols are promising drug candidates in view of their interference with cellular membranes. Knowledge of their lipid interactions and membrane-bound structure is needed to understand their activity and should be, in principle, accessible by solid-state NMR spectroscopy. However, their unusual amino acid composition and noncanonical conformations make it very challenging to find suitable labels for NMR spectroscopy. Particularly in the case of short sequences, new strategies are required to maximize the structural information that can be obtained from each label. Herein, l-3-(trifluoromethyl)bicyclopent[1.1.1]-1-ylglycine, (R)- and (S)-trifluoromethylalanine, and 15 N-backbone labels, each probing a different direction in the molecule, have been combined to elucidate the conformation and membrane alignment of harzianin HK-VI. For the short sequence of 11 amino acids, 12 orientational constraints have been obtained by using 19 F and 15 N NMR spectroscopy. This strategy revealed a β-bend ribbon structure, which becomes realigned in the membrane from a surface-parallel state towards a membrane-spanning state, with increasing positive spontaneous curvature of the lipids.Entities:
Keywords: NMR spectroscopy; amino acids; fluorine; isotopic labeling; peptides
Mesh:
Substances:
Year: 2018 PMID: 29323432 DOI: 10.1002/chem.201704307
Source DB: PubMed Journal: Chemistry ISSN: 0947-6539 Impact factor: 5.236