| Literature DB >> 29316886 |
Ning Liu1, Qiuying Huang2, Qingge Li2, Dehua Zhao3, Xiaole Li3, Lixia Cui4, Ying Bai1, Yin Feng1, Xiangdong Kong5.
Abstract
Following publication of the original article [1], the authors reported an error in Table 3 on page 4. Variant No. 18 should be " p.Ser339Phe c.1016C>T " (as given in Number 117 of Additional file 2).Entities:
Year: 2018 PMID: 29316886 PMCID: PMC5759169 DOI: 10.1186/s12881-017-0516-2
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
| Number | Trivial name | Systematic name | Location | Variant type | Allele frequency |
|---|---|---|---|---|---|
| 1 | p.S16* | c.47-48delCT | Exon 1 | Deletion | 0.2 |
| 2 | — | c.61-3T>C | Intron 1 | Splicing | 0.1 |
| 3 | p.Arg53His | c.158G>A | Exon 2 | Missense | 4.7 |
| 4 | p.Arg53Cys | c.157C>T | Exon 2 | Missense | 0.1 |
| 5 | p.Glu44del | c.131-133delAAG | Exon 2 | Deletion | 0.2 |
| 6 | p.Glu56Asp | c.168G>T | Exon 2 | Missense | 0.1 |
| 7 | — | c.168+2T>C | Intron 2 | Splicing | 0.1 |
| 8 | — | c.168+5G>C | Intron 2 | Splicing | 0.1 |
| 9 | p.Ile65Thr | c.194T>C | Exon 3 | Missense | 0.5 |
| 10 | p.Ile65Ser | c.194T>G | Exon 3 | Missense | 0.2 |
| 11 | p.Ser70del | c.208-210delTCT | Exon 3 | Deletion | 2.5 |
| 12 |
| c.223G>C | Exon 3 | Missense | 0.1 |
| 13 | p.Tyr77* | c.231T>G | Exon 3 | Nonsense | 0.1 |
| 14 |
| c.280A>G | Exon 3 | Missense | 0.1 |
| 15 | p.Asp101Asn | c.301G>A | Exon 3 | Missense | 0.3 |
| 16 | p.Gly103Asp | c.308G>A | Exon 3 | Missense | 0.2 |
| 17 | p.His107Arg | c.320A>G | Exon 3 | Missense | 1.8 |
| 18 | p.Arg111* | c.331C>T | Exon 3 | Nonsense | 4.4 |
| 19 | p.Glu78Phefs*13 | c.232-235delGAAT | Exon 3 | Deletion | 0.1 |
| 20 | p.Ile95del | c.284-286deTCA | Exon 3 | Deletion | 0.1 |
| 21 | IVS3-2A>G | c.353-2A>G | Intron3 | Splicing | 0.1 |
| 22 | p.Pro147Leu | c.440C>T | Exon 4 | Missense | 0.2 |
| 23 | — | c.441+1G>A | Intron 4 | Splicing | 0.1 |
| 24 | — | c.441+3G>C | Intron 4 | Splicing | 0.4 |
| 25 | — | c.442-1G>A | Intron 4 | Splicing | 3.4 |
| 26 | — | c.442-1G>C | Intron 4 | Splicing | 0.1 |
| 27 | — |
| Intron 4 | Splicing | 0.1 |
| 28 | p.Tyr154*△ | c.462C>A | Exon 5 | Nonsense | 0.1 |
| 29 | p.Arg155His | c.464G>A | Exon 5 | Missense | 0.2 |
| 30 | p.Arg156Pro | c.466G>C | Exon 5 | Missense | 0.2 |
| 31 | p.Arg158Trp | c.472C>T | Exon 5 | Missense | 0.5 |
| 32 | p.Arg158Gln | c.473G>A | Exon 5 | Missense | 0.5 |
| 33 | p.Gln160* | c.478 C>T | Exon 5 | Nonsense | 0.2 |
| 34 | p.Phe161Ser | c.482T>C | Exon 5 | Missense | 1.0 |
| 35 | p.Ala165Asp | c.494C>A | Exon 5 | Missense | 0.1 |
| 36 | p.Tyr166* | c.498C>G | Exon 5 | Nonsense | 0.6 |
| 37 | p.Arg169Ser | c.505C>A | Exon 5 | Missense | 0.1 |
| 38 | p.Arg169Cys | c.505C>T | Exon 5 | Missense | 0.2 |
| 39 | p.Arg169His | c.506G>A | Exon 5 | Missense | 0.1 |
| 40 | p.His170Arg | c.509A>G | Exon 5 | Missense | 0.1 |
| 41 | p.His170Gln | c. 510T>A | Exon 5 | Missense | 0.3 |
| 42 |
| c.463delC | Exon 5 | Deletion | 0.1 |
| 43 | — | c.509+1G>A | Intron 5 | Splicing | 0.1 |
| 44 | — | c.510-1G>A | Intron 5 | Splicing | 0.1 |
| 45 | — | c.510-1G>C | Intron 5 | Splicing | 0.1 |
| 46 | p.Gly171Arg | c.511G>A | Exon 6 | Missense | 0.1 |
| 47 | p.Gln172His | c.516G>T | Exon 6 | Missense | 0.1 |
| 48 | p.Arg176* | c.526C>T | Exon 6 | Nonsense | 2.0 |
| 49 | p.Glu178Lys | c.532 G>A | Exon 6 | Missense | 0.1 |
| 50 | p.Glu183Gly | c.548A>G | Exon 6 | Missense | 0.1 |
| 51 | p.Trp187* | c.561G>A | Exon 6 | Nonsense | 0.1 |
| 52 | p.Trp187Arg | c.559T>C | Exon 6 | Missense | 0.1 |
| 53 |
| c.563G>T | Exon 6 | Missense | 0.1 |
| 54 | p.His201Arg | c.602A>G | Exon 6 | Missense | 0.1 |
| 55 |
| c.607T>A | Exon 6 | Missense | 0.1 |
| 56 | p. Ex6-96A>G | c.611A>G | Exon 6 | Splicing | 0.1 |
| 57 | p.Cys217Tyr | c.650G>A | Exon 6 | Missense | 0.1 |
| 58 | p.Ile224Thr | c.671T>C | Exon 6 | Missense | 0.4 |
| 59 |
| c.679C>G | Exon 6 | Missense | 0.1 |
| 60 |
| c.684A>C | Exon 6 | Missense | 0.1 |
| 61 | p.Val230Ile | c.688G>A | Exon 6 | Missense | 0.5 |
| 62 | p.Val230A | c.689T>C | Exon 6 | Missense | 0.1 |
| 63 | p.Gln232* | c.694C>T | Exon 6 | Nonsense | 0.2 |
| 64 | p.Phe233Leu | c.699C>A | Exon 6 | Missense | 0.2 |
| 65 |
| c.580C>GA | Exon 6 | Indel | 0.1 |
| 66 |
| c.690-691insG | Exon 6 | Insertion | 0.1 |
| 67 | — | c.707-1G>A | Intron 6 | Splicing | 0.2 |
| 68 | p.Arg241Cys | c.721C>T | Exon 7 | Missense | 4.6 |
| 69 | p.Arg241His | c.722G>A | Exon 7 | Missense | 0.4 |
| 70 | p.Arg241Leu | c.722G>T | Exon 7 | Missense | 0.1 |
| 71 | p.Leu242Phe | c.724C>T | Exon 7 | Missense | 0.2 |
| 72 | p.Arg243Gln | c.728G>A | Exon 7 | Missense | 17.7 |
| 73 | p.Arg243* | c.727C>T | Exon 7 | Nonsense | 0.1 |
| 74 | p.Val245Met | c.733G>A | Exon 7 | Missense | 0.1 |
| 75 | p.Gly247Val | c.740G>T | Exon 7 | Missense | 1.5 |
| 76 | p.Gly247Arg | c.739G>C | Exon 7 | Missense | 0.7 |
| 77 |
| c.749C>T | Exon 7 | Missense | 0.1 |
| 78 | p.Arg252Gln | c.755G>A | Exon 7 | Missense | 0.6 |
| 79 | p.Arg252Trp | c.754C>T | Exon 7 | Missense | 0.3 |
| 80 | p.Arg252Gly | c. 754C>G | Exon 7 | Missense | 0.1 |
| 81 | p.Arg252Pro | c.755G>C | Exon 7 | Missense | 0.1 |
| 82 | p.Leu255Ser | c.764T>C | Exon 7 | Missense | 0.4 |
| 83 | p.Gly257Val | c.770G>T | Exon 7 | Missense | 0.6 |
| 84 | p.Arg261Gln | c.782G>A | Exon 7 | Missense | 1.7 |
| 85 | p.Arg261* | c.781C>T | Exon 7 | Nonsense | 0.1 |
| 86 | p.Phe263Leu | c.787T>C | Exon 7 | Missense | 0.1 |
| 87 | p.Gln267Glu | c.799C>G | Exon 7 | Missense | 0.2 |
| 88 |
| c.804C>A | Exon 7 | Nonsense | 0.1 |
| 89 | p.Arg270Lys | c.809G>A | Exon 7 | Missense | 0.2 |
| 90 | p.Arg270Ile | c. 809G>T | Exon 7 | Missense | 0.1 |
| 91 | p.His271Arg | c.812A>G | Exon 7 | Missense | 0.1 |
| 92 | p.Pro275Leu | c.824C>T | Exon 7 | Missense | 0.2 |
| 93 | p.Met276Lys | c.827T>A | Exon 7 | Missense | 0.2 |
| 94 | p.Met276Arg | c.827T>G | Exon 7 | Missense | 0.1 |
| 95 | p.Thr278Ile | c.833C>T | Exon 7 | Missense | 0.1 |
| 96 | p.Glu280Lys | c.838G>A | Exon 7 | Missense | 0.4 |
| 97 | p.Pro281Arg | c.842C>G | Exon 7 | Missense | 0.1 |
| 98 | p.Arg241Profs*100 | c.722delG | Exon 7 | Deletion | 0.5 |
| 99 | — | c.842+1G>A | Intron 7 | Splicing | 0.2 |
| 100 | — | c.843-1G>A | Intron 7 | Splicing | 0.2 |
| 101 | — | c.842+2T>A | Intron 7 | Splicing | 1.5 |
| 102 | p.Val291Met | c.871G>A | Exon 8 | Missense | 0.1 |
| 103 | p.Ala300Ser | c.898G>T | Exon 8 | Missense | 0.1 |
| 104 | p.Ser303Pro | c.907T>C | Exon 8 | Missense | 0.1 |
| 105 | p.Ser303Profs*38 | c.907delT | Exon 8 | Deletion | 0.1 |
| 106 | — | c.912+1G>A | Intron 8 | Splicing | 0.1 |
| 107 | — |
| Intron 8 | Splicing | 0.1 |
| 108 | — | c.913-7A>G | Intron 8 | Splicing | 0.2 |
| 109 | p.Ser310Phe | c.929C>T | Exon 9 | Missense | 0.1 |
| 110 |
| c.929C>G | Exon 9 | Missense | 0.1 |
| 111 | p.Gly312Val | c.935G>T | Exon 9 | Missense | 0.1 |
| 112 | p.Pro314Thr | c.940C>A | Exon 9 | Missense | 0.4 |
| 113 | p.Ala322Thr | c.964G>A | Exon 9 | Missense | 0.2 |
| 114 | p.Ile324Asn | c.971T>A | Exon 10 | Missense | 0.4 |
| 115 | p.Trp326* | c.977G>A | Exon 10 | Nonsense | 0.2 |
| 116 | p.Phe331Ser | c.992T>C | Exon 10 | Missense | 0.1 |
| 117 |
| c.1016C>T | Exon 10 | Missense | 0.1 |
| 118 |
| c.1023G>C | Exon 10 | Missense | 0.1 |
| 119 | p.Ala342Hisfs*58 | c.1024delG | Exon 10 | Deletion | 0.1 |
| 120 | p.Gly344Asp | c.1031G>A | Exon 10 | Missense | 0.1 |
| 121 | p.Gly344Ser | c.1030G>A | Exon 10 | Missense | 0.1 |
| 122 | p.Ala345Thr | c.1033G>A | Exon 10 | Missense | 0.1 |
| 123 | p.Ser349Ala | c.1045T>G | Exon 10 | Missense | 0.4 |
| 124 | p.Gly352Arg | c.1054G>C | Exon 10 | Missense | 0.1 |
| 125 | p.Gln355* | c.1063C>T | Exon 10 | Nonsense | 0.1 |
| 126 | — | c.1066-1G>T | Intron 10 | Splicing | 0.2 |
| 127 | — | c.1066-11G>A | Intron 10 | Splicing | 0.1 |
| 128 | — |
| Intron 10 | Splicing | 0.1 |
| 129 | — | c.1066-14C>G | Intron 10 | Splicing | 0.1 |
| 130 | p.Tyr356* | c.1068C>A | Exon 11 | Nonsense | 4.7 |
| 131 | p.Cys357* | c.1071C>A | Exon 11 | Nonsense | 0.1 |
| 132 |
| c.1084C>T | Exon 11 | Missense | 0.1 |
| 133 | p.Pro362Thr | c.1084C>A | Exon 11 | Missense | 0.1 |
| 134 | p.Lys363Asn | c.1089G>T | Exon 11 | Missense | 0.2 |
| 135 |
| c.1096C>G | Exon 11 | Missense | 0.1 |
| 136 | p.Thr372Ser | c.1114A>T | Exon 11 | Missense | 0.1 |
| 137 | p.Thr372Arg | c.1115 C>G | Exon 11 | Missense | 0.1 |
| 138 | p.Ala373Thr | c.1117G>A | Exon 11 | Missense | 0.1 |
| 139 | p.Gln375Glu | c.1123C>G | Exon 11 | Missense | 0.3 |
| 140 | p.Thr380Met | c.1139C>T | Exon 11 | Missense | 0.2 |
| 141 | p.Val388Met | c.1162G>A | Exon 11 | Missense | 0.1 |
| 142 | p.Ser391Thr | c.1172G>C | Exon 11 | Missense | 0.1 |
| 143 | p.Phe392Ile | c.1174T>A | Exon 11 | Missense | 0.4 |
| 144 | p.Lys398= | c.1194A>G | Exon 11 | Splicing | 0.1 |
| 145 | p.Val399= | c.1197A>T | Exon 11 | Splicing | 6.4 |
| 146 | p.Arg400Thr | c.1199G>C | Exon 11 | Missense | 0.5 |
| 147 | p.Arg400Lys | c.1199G>A | Exon 11 | Missense | 0.2 |
| 148 | — | c.1199+1G>C | Intron11 | Splicing | 0.2 |
| 149 | — | c.1199+2T>C | Intron 11 | Splicing | 0.2 |
| 150 | — | c.1200-1G>C | Intron 11 | Splicing | 0.1 |
| 151 | — | c.1200-1G>A | Intron 11 | Splicing | 0.2 |
| 152 | — |
| Intron11 | Splicing | 0.2 |
| 153 | p.Ala403Val | c.1208C>T | Exon 12 | Missense | 1.0 |
| 154 | p.Arg408Trp | c.1222C>T | Exon 12 | Missense | 0.4 |
| 155 | p.Arg408Gln | c.1223G>A | Exon 12 | Missense | 0.6 |
| 156 | p.Arg413Pro | c.1238G>C | Exon 12 | Missense | 4.6 |
| 157 | p.Tyr414* | c.1242C>A | Exon 12 | Nonsense | 0.1 |
| 158 | p.Asp415Tyr | c.1243G>T | Exon 12 | Missense | 0.1 |
| 159 | p.Thr418Pro | c.1252A>C | Exon 12 | Missense | 0.6 |
| 160 | p.Gln419Arg | c.1256A>G | Exon 12 | Missense | 0.7 |
| 161 | p.Ile421Thr | c.1262T>C | Exon 12 | Missense | 0.2 |
| 162 | p.Gln429Lys | c.1285C>A | Exon 12 | Missense | 0.1 |
| 163 | p.Leu430Pro | c.1289T>C | Exon 12 | Missense | 0.2 |
| 164 | p.Ala434Asp | c.1301C>A | Exon 12 | Missense | 1.7 |
| 165 | — | c.1315+4A>G | Intron 12 | Splicing | 0.1 |
| 166 | — | c.1315+6T>A | Intron 12 | Splicing | 0.3 |
| 167 | — | c.1316-2A>C | Intron 12 | Splicing | 0.2 |
| 168 |
| c.1330C>T | Exon 13 | Missense | 0.1 |
| 169 | p.*453Proext*33 | c.1357delTAAAG | Exon 13 | Deletion | 0.1 |
| 170 | 5’ UTR | Deletion | 0.6 | ||
| 171 | c.(168+1_169-1)_c. (352+1_353-1)del | E3 | Deletion | 0.1 | |
| 172 | c. (441+1_442-1)_(842+1_843-1)del | E4~E7 | Deletion | 0.1 | |
| 173 | c. (441+1_442-1) _c. (509+1_510-1)del | E5 | Deletion | 0.1 | |
| 174 | c. (441+1_442-1)_(509+1_510-1)del | E4~E5 | Deletion | 0.2 | |
| Detected | 96.6 | ||||
| Unknown | 3.4 | ||||
| Total | 100 | ||||
△Novel alleles identified in the current study.