Literature DB >> 29316886

Correction to: Spectrum of PAH gene variants among a population of Han Chinese patients with phenylketonuria from northern China.

Ning Liu1, Qiuying Huang2, Qingge Li2, Dehua Zhao3, Xiaole Li3, Lixia Cui4, Ying Bai1, Yin Feng1, Xiangdong Kong5.   

Abstract

Following publication of the original article [1], the authors reported an error in Table 3 on page 4. Variant No. 18 should be " p.Ser339Phe c.1016C>T " (as given in Number 117 of Additional file 2).

Entities:  

Year:  2018        PMID: 29316886      PMCID: PMC5759169          DOI: 10.1186/s12881-017-0516-2

Source DB:  PubMed          Journal:  BMC Med Genet        ISSN: 1471-2350            Impact factor:   2.103


Correction

Following publication of the original article [1], the authors reported an error in Table 3 on page 4. Variant No. 18 should be “p.Ser339Phe c.1016C>T” (as given in Number 117 of Additional file 2). Other errors were found in the original Additional file 2, which has been replaced with an updated version (see below). Additional file 2. Spectrum of PAH gene variants in a Chinese Han population △Novel alleles identified in the current study.
NumberTrivial name(Protein effect)Systematic name(DNA level)LocationVariant typeAllele frequency(%)
1p.S16*c.47-48delCTExon 1Deletion0.2
2c.61-3T>CIntron 1Splicing0.1
3p.Arg53Hisc.158G>AExon 2Missense4.7
4p.Arg53Cysc.157C>TExon 2Missense0.1
5p.Glu44delc.131-133delAAGExon 2Deletion0.2
6p.Glu56Aspc.168G>TExon 2Missense0.1
7c.168+2T>CIntron 2Splicing0.1
8c.168+5G>CIntron 2Splicing0.1
9p.Ile65Thrc.194T>CExon 3Missense0.5
10p.Ile65Serc.194T>GExon 3Missense0.2
11p.Ser70delc.208-210delTCTExon 3Deletion2.5
12 p.Asp75His c.223G>CExon 3Missense0.1
13p.Tyr77*c.231T>GExon 3Nonsense0.1
14 p.Ile94Val c.280A>GExon 3Missense0.1
15p.Asp101Asnc.301G>AExon 3Missense0.3
16p.Gly103Aspc.308G>AExon 3Missense0.2
17p.His107Argc.320A>GExon 3Missense1.8
18p.Arg111*c.331C>TExon 3Nonsense4.4
19p.Glu78Phefs*13c.232-235delGAATExon 3Deletion0.1
20p.Ile95delc.284-286deTCAExon 3Deletion0.1
21IVS3-2A>Gc.353-2A>GIntron3Splicing0.1
22p.Pro147Leuc.440C>TExon 4Missense0.2
23c.441+1G>AIntron 4Splicing0.1
24c.441+3G>CIntron 4Splicing0.4
25c.442-1G>AIntron 4Splicing3.4
26c.442-1G>CIntron 4Splicing0.1
27 c.442-14C>T Intron 4Splicing0.1
28p.Tyr154*c.462C>AExon 5Nonsense0.1
29p.Arg155Hisc.464G>AExon 5Missense0.2
30p.Arg156Proc.466G>CExon 5Missense0.2
31p.Arg158Trpc.472C>TExon 5Missense0.5
32p.Arg158Glnc.473G>AExon 5Missense0.5
33p.Gln160*c.478 C>TExon 5Nonsense0.2
34p.Phe161Serc.482T>CExon 5Missense1.0
35p.Ala165Aspc.494C>AExon 5Missense0.1
36p.Tyr166*c.498C>GExon 5Nonsense0.6
37p.Arg169Serc.505C>AExon 5Missense0.1
38p.Arg169Cysc.505C>TExon 5Missense0.2
39p.Arg169Hisc.506G>AExon 5Missense0.1
40p.His170Argc.509A>GExon 5Missense0.1
41p.His170Glnc. 510T>AExon 5Missense0.3
42 p.Arg155Valfs*40 c.463delCExon 5Deletion0.1
43c.509+1G>AIntron 5Splicing0.1
44c.510-1G>AIntron 5Splicing0.1
45c.510-1G>CIntron 5Splicing0.1
46p.Gly171Argc.511G>AExon 6Missense0.1
47p.Gln172Hisc.516G>TExon 6Missense0.1
48p.Arg176*c.526C>TExon 6Nonsense2.0
49p.Glu178Lysc.532 G>AExon 6Missense0.1
50p.Glu183Glyc.548A>GExon 6Missense0.1
51p.Trp187*c.561G>AExon 6Nonsense0.1
52p.Trp187Argc.559T>CExon 6Missense0.1
53 p.Gly188Val c.563G>TExon 6Missense0.1
54p.His201Argc.602A>GExon 6Missense0.1
55 p.Cys203Ser c.607T>AExon 6Missense0.1
56p. Ex6-96A>Gc.611A>GExon 6Splicing0.1
57p.Cys217Tyrc.650G>AExon 6Missense0.1
58p.Ile224Thrc.671T>CExon 6Missense0.4
59 p.Leu227Val c.679C>GExon 6Missense0.1
60 p.Glu228Asp c.684A>CExon 6Missense0.1
61p.Val230Ilec.688G>AExon 6Missense0.5
62p.Val230Ac.689T>CExon 6Missense0.1
63p.Gln232*c.694C>TExon 6Nonsense0.2
64p.Phe233Leuc.699C>AExon 6Missense0.2
65 p.Leu194Glufs*6 c.580C>GAExon 6Indel0.1
66 p.Ser231Valfs*52 c.690-691insGExon 6Insertion0.1
67c.707-1G>AIntron 6Splicing0.2
68p.Arg241Cysc.721C>TExon 7Missense4.6
69p.Arg241Hisc.722G>AExon 7Missense0.4
70p.Arg241Leuc.722G>TExon 7Missense0.1
71p.Leu242Phec.724C>TExon 7Missense0.2
72p.Arg243Glnc.728G>AExon 7Missense17.7
73p.Arg243*c.727C>TExon 7Nonsense0.1
74p.Val245Metc.733G>AExon 7Missense0.1
75p.Gly247Valc.740G>TExon 7Missense1.5
76p.Gly247Argc.739G>CExon 7Missense0.7
77 p.Ser250Phe c.749C>TExon 7Missense0.1
78p.Arg252Glnc.755G>AExon 7Missense0.6
79p.Arg252Trpc.754C>TExon 7Missense0.3
80p.Arg252Glyc. 754C>GExon 7Missense0.1
81p.Arg252Proc.755G>CExon 7Missense0.1
82p.Leu255Serc.764T>CExon 7Missense0.4
83p.Gly257Valc.770G>TExon 7Missense0.6
84p.Arg261Glnc.782G>AExon 7Missense1.7
85p.Arg261*c.781C>TExon 7Nonsense0.1
86p.Phe263Leuc.787T>CExon 7Missense0.1
87p.Gln267Gluc.799C>GExon 7Missense0.2
88 p.Tyr268* c.804C>AExon 7Nonsense0.1
89p.Arg270Lysc.809G>AExon 7Missense0.2
90p.Arg270Ilec. 809G>TExon 7Missense0.1
91p.His271Argc.812A>GExon 7Missense0.1
92p.Pro275Leuc.824C>TExon 7Missense0.2
93p.Met276Lysc.827T>AExon 7Missense0.2
94p.Met276Argc.827T>GExon 7Missense0.1
95p.Thr278Ilec.833C>TExon 7Missense0.1
96p.Glu280Lysc.838G>AExon 7Missense0.4
97p.Pro281Argc.842C>GExon 7Missense0.1
98p.Arg241Profs*100c.722delGExon 7Deletion0.5
99c.842+1G>AIntron 7Splicing0.2
100c.843-1G>AIntron 7Splicing0.2
101c.842+2T>AIntron 7Splicing1.5
102p.Val291Metc.871G>AExon 8Missense0.1
103p.Ala300Serc.898G>TExon 8Missense0.1
104p.Ser303Proc.907T>CExon 8Missense0.1
105p.Ser303Profs*38c.907delTExon 8Deletion0.1
106c.912+1G>AIntron 8Splicing0.1
107 c.912+16T>A Intron 8Splicing0.1
108c.913-7A>GIntron 8Splicing0.2
109p.Ser310Phec.929C>TExon 9Missense0.1
110 p.Ser310Cys c.929C>GExon 9Missense0.1
111p.Gly312Valc.935G>TExon 9Missense0.1
112p.Pro314Thrc.940C>AExon 9Missense0.4
113p.Ala322Thrc.964G>AExon 9Missense0.2
114p.Ile324Asnc.971T>AExon 10Missense0.4
115p.Trp326*c.977G>AExon 10Nonsense0.2
116p.Phe331Serc.992T>CExon 10Missense0.1
117 p.Ser339Phe c.1016C>TExon 10Missense0.1
118 p.Lys341Asn c.1023G>CExon 10Missense0.1
119p.Ala342Hisfs*58c.1024delGExon 10Deletion0.1
120p.Gly344Aspc.1031G>AExon 10Missense0.1
121p.Gly344Serc.1030G>AExon 10Missense0.1
122p.Ala345Thrc.1033G>AExon 10Missense0.1
123p.Ser349Alac.1045T>GExon 10Missense0.4
124p.Gly352Argc.1054G>CExon 10Missense0.1
125p.Gln355*c.1063C>TExon 10Nonsense0.1
126c.1066-1G>TIntron 10Splicing0.2
127c.1066-11G>AIntron 10Splicing0.1
128 c.1066-13delT Intron 10Splicing0.1
129c.1066-14C>GIntron 10Splicing0.1
130p.Tyr356*c.1068C>AExon 11Nonsense4.7
131p.Cys357*c.1071C>AExon 11Nonsense0.1
132 p.Pro362Ser c.1084C>TExon 11Missense0.1
133p.Pro362Thrc.1084C>AExon 11Missense0.1
134p.Lys363Asnc.1089G>TExon 11Missense0.2
135 p.Pro366Ala c.1096C>GExon 11Missense0.1
136p.Thr372Serc.1114A>TExon 11Missense0.1
137p.Thr372Argc.1115 C>GExon 11Missense0.1
138p.Ala373Thrc.1117G>AExon 11Missense0.1
139p.Gln375Gluc.1123C>GExon 11Missense0.3
140p.Thr380Metc.1139C>TExon 11Missense0.2
141p.Val388Metc.1162G>AExon 11Missense0.1
142p.Ser391Thrc.1172G>CExon 11Missense0.1
143p.Phe392Ilec.1174T>AExon 11Missense0.4
144p.Lys398=c.1194A>GExon 11Splicing0.1
145p.Val399=c.1197A>TExon 11Splicing6.4
146p.Arg400Thrc.1199G>CExon 11Missense0.5
147p.Arg400Lysc.1199G>AExon 11Missense0.2
148c.1199+1G>CIntron11Splicing0.2
149c.1199+2T>CIntron 11Splicing0.2
150c.1200-1G>CIntron 11Splicing0.1
151c.1200-1G>AIntron 11Splicing0.2
152 c.1200-3T>G Intron11Splicing0.2
153p.Ala403Valc.1208C>TExon 12Missense1.0
154p.Arg408Trpc.1222C>TExon 12Missense0.4
155p.Arg408Glnc.1223G>AExon 12Missense0.6
156p.Arg413Proc.1238G>CExon 12Missense4.6
157p.Tyr414*c.1242C>AExon 12Nonsense0.1
158p.Asp415Tyrc.1243G>TExon 12Missense0.1
159p.Thr418Proc.1252A>CExon 12Missense0.6
160p.Gln419Argc.1256A>GExon 12Missense0.7
161p.Ile421Thrc.1262T>CExon 12Missense0.2
162p.Gln429Lysc.1285C>AExon 12Missense0.1
163p.Leu430Proc.1289T>CExon 12Missense0.2
164p.Ala434Aspc.1301C>AExon 12Missense1.7
165c.1315+4A>GIntron 12Splicing0.1
166c.1315+6T>AIntron 12Splicing0.3
167c.1316-2A>CIntron 12Splicing0.2
168 p.Leu444Phe c.1330C>TExon 13Missense0.1
169p.*453Proext*33c.1357delTAAAGExon 13Deletion0.1
1705’ UTR~E1Deletion0.6
171c.(168+1_169-1)_c. (352+1_353-1)delE3Deletion0.1
172c. (441+1_442-1)_(842+1_843-1)delE4~E7Deletion0.1
173c. (441+1_442-1) _c. (509+1_510-1)delE5Deletion0.1
174c. (441+1_442-1)_(509+1_510-1)delE4~E5Deletion0.2
Detected96.6
Unknown3.4
Total100

△Novel alleles identified in the current study.

  1 in total

1.  Spectrum of PAH gene variants among a population of Han Chinese patients with phenylketonuria from northern China.

Authors:  Ning Liu; Qiuying Huang; Qingge Li; Dehua Zhao; Xiaole Li; Lixia Cui; Ying Bai; Yin Feng; Xiangdong Kong
Journal:  BMC Med Genet       Date:  2017-10-05       Impact factor: 2.103

  1 in total
  1 in total

1.  Molecular characterization of Thai patients with phenylalanine hydroxylase deficiency and in vitro functional study of two novel PAH variants.

Authors:  Lukana Ngiwsara; Nithiwat Vatanavicharn; Phannee Sawangareetrakul; Somporn Liammongkolkul; Pisanu Ratanarak; Boonchai Boonyawat; Chantragan Srisomsap; Voraratt Champattanachai; James Ketudat-Cairns; Pornswan Wasant; Jisnuson Svasti
Journal:  Mol Biol Rep       Date:  2021-03-07       Impact factor: 2.316

  1 in total

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