Literature DB >> 29314842

Exploration versus Exploitation in Global Atomistic Structure Optimization.

Mathias S Jørgensen1, Uffe F Larsen1, Karsten W Jacobsen2, Bjørk Hammer1.   

Abstract

The ability to navigate vast energy landscapes of molecules, clusters, and solids is a necessity for discovering novel compounds in computational chemistry and materials science. For high-dimensional systems, it is only computationally feasible to search a small portion of the landscape, and hence, the search strategy is of critical importance. Introducing Bayesian optimization concepts in an evolutionary algorithm framework, we quantify the concepts of exploration and exploitation in global minimum searches. The method allows us to control the balance between probing unknown regions of the landscape (exploration) and investigating further regions of the landscape known to have low-energy structures (exploitation). The search for global minima structures proves significantly faster with the optimal balance for three test systems (molecular compounds) and to a lesser extent also for a crystalline surface reconstruction. In addition, global search behaviors are analyzed to provide reasonable grounds for an optimal balance for different problems.

Year:  2018        PMID: 29314842     DOI: 10.1021/acs.jpca.8b00160

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

Review 1.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

Review 2.  Dynamics of Heterogeneous Catalytic Processes at Operando Conditions.

Authors:  Xiangcheng Shi; Xiaoyun Lin; Ran Luo; Shican Wu; Lulu Li; Zhi-Jian Zhao; Jinlong Gong
Journal:  JACS Au       Date:  2021-11-04

3.  Systematic Comparison of Genetic Algorithm and Basin Hopping Approaches to the Global Optimization of Si(111) Surface Reconstructions.

Authors:  Maximilian N Bauer; Matt I J Probert; Chiara Panosetti
Journal:  J Phys Chem A       Date:  2022-05-06       Impact factor: 2.944

Review 4.  Towards operando computational modeling in heterogeneous catalysis.

Authors:  Lukáš Grajciar; Christopher J Heard; Anton A Bondarenko; Mikhail V Polynski; Jittima Meeprasert; Evgeny A Pidko; Petr Nachtigall
Journal:  Chem Soc Rev       Date:  2018-11-12       Impact factor: 54.564

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.