Literature DB >> 29314451

Methodology Development in Directed Evolution: Exploring Options when Applying Triple-Code Saturation Mutagenesis.

Ge Qu1, Richard Lonsdale2,3, Peiyuan Yao1, Guangyue Li2,3, Beibei Liu1, Manfred T Reetz1,2,3, Zhoutong Sun1.   

Abstract

Directed evolution of stereo- or regioselective enzymes as catalysts in asymmetric transformations is of particular interest in organic synthesis. Upon evolving these biocatalysts, screening is the bottleneck. To beat the numbers problem most effectively, methods and strategies for building "small but smart" mutant libraries have been developed. Herein, we compared two different strategies regarding the application of triple-code saturation mutagenesis (TCSM) at multiresidue sites of the Thermoanaerobacter brockii alcohol dehydrogenase by using distinct reduced amino-acid alphabets. By using the synthetically difficult-to-reduce prochiral ketone tetrahydrofuran-3-one as a substrate, highly R- and S-selective variants were obtained (92-99 % ee) with minimal screening. The origin of stereoselectivity was provided by molecular dynamics analyses, which is discussed in terms of the Bürgi-Dunitz trajectory.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  alcohol dehydrogenase; biocatalysis; directed evolution; saturation mutagenesis; stereoselectivity

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Year:  2018        PMID: 29314451     DOI: 10.1002/cbic.201700562

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  1 in total

1.  In Silico Prediction Methods for Site-Saturation Mutagenesis.

Authors:  Ge Qu; Zhoutong Sun
Journal:  Methods Mol Biol       Date:  2022
  1 in total

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