Literature DB >> 29307513

Visualizing Dynamics of Cell Signaling In Vivo with a Phase Separation-Based Kinase Reporter.

Qiang Zhang1, Hai Huang2, Luqing Zhang2, Roland Wu2, Chan-I Chung1, Shao-Qing Zhang2, Joaquim Torra3, Antonino Schepis2, Shaun R Coughlin2, Thomas B Kornberg2, Xiaokun Shu4.   

Abstract

Visualizing dynamics of kinase activity in living animals is essential for mechanistic understanding of cell and developmental biology. We describe GFP-based kinase reporters that phase-separate upon kinase activation via multivalent protein-protein interactions, forming intensively fluorescent droplets. Called SPARK (separation of phases-based activity reporter of kinase), these reporters have large dynamic range (fluorescence change), high brightness, fast kinetics, and are reversible. The SPARK-based protein kinase A (PKA) reporter reveals oscillatory dynamics of PKA activities upon G protein-coupled receptor activation. The SPARK-based extracellular signal-regulated kinase (ERK) reporter unveils transient dynamics of ERK activity during tracheal metamorphosis in live Drosophila. Because of intensive brightness and simple signal pattern, SPARKs allow easy examination of kinase signaling in living animals in a qualitative way. The modular design of SPARK will facilitate development of reporters of other kinases. Published by Elsevier Inc.

Entities:  

Keywords:  Drosophila; ERK; G protein coupled receptor; GFP; kinase; kinase reporter; phase separation; protein kinase A; protein-protein interaction; receptor tyrosine kinase

Mesh:

Substances:

Year:  2018        PMID: 29307513      PMCID: PMC5788022          DOI: 10.1016/j.molcel.2017.12.008

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  63 in total

Review 1.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

2.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

Authors:  Yongdae Shin; Joel Berry; Nicole Pannucci; Mikko P Haataja; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2016-12-29       Impact factor: 41.582

Review 3.  The regulation and functions of MAPK pathways in Drosophila.

Authors:  Ben-Zion Shilo
Journal:  Methods       Date:  2014-02-14       Impact factor: 3.608

4.  Prediction and validation of the distinct dynamics of transient and sustained ERK activation.

Authors:  Satoru Sasagawa; Yu-ichi Ozaki; Kazuhiro Fujita; Shinya Kuroda
Journal:  Nat Cell Biol       Date:  2005-03-27       Impact factor: 28.824

5.  Activation and targeting of extracellular signal-regulated kinases by beta-arrestin scaffolds.

Authors:  L M Luttrell; F L Roudabush; E W Choy; W E Miller; M E Field; K L Pierce; R J Lefkowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-20       Impact factor: 11.205

6.  Growth factor-induced MAPK network topology shapes Erk response determining PC-12 cell fate.

Authors:  Silvia D M Santos; Peter J Verveer; Philippe I H Bastiaens
Journal:  Nat Cell Biol       Date:  2007-02-18       Impact factor: 28.824

7.  A genetically encoded fluorescent sensor of ERK activity.

Authors:  Christopher D Harvey; Anka G Ehrhardt; Cristina Cellurale; Haining Zhong; Ryohei Yasuda; Roger J Davis; Karel Svoboda
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

Review 8.  Receptor tyrosine kinases in Drosophila development.

Authors:  Richelle Sopko; Norbert Perrimon
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-06-01       Impact factor: 10.005

9.  Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation.

Authors:  Guillaume Lebon; Tony Warne; Patricia C Edwards; Kirstie Bennett; Christopher J Langmead; Andrew G W Leslie; Christopher G Tate
Journal:  Nature       Date:  2011-05-18       Impact factor: 49.962

10.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

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  25 in total

1.  Dynamic Imaging of Small Molecule Induced Protein-Protein Interactions in Living Cells with a Fluorophore Phase Transition Based Approach.

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Journal:  Anal Chem       Date:  2018-11-30       Impact factor: 6.986

Review 2.  Illuminating the kinome: Visualizing real-time kinase activity in biological systems using genetically encoded fluorescent protein-based biosensors.

Authors:  Danielle L Schmitt; Sohum Mehta; Jin Zhang
Journal:  Curr Opin Chem Biol       Date:  2020-01-03       Impact factor: 8.822

Review 3.  Transgenic mice encoding modern imaging probes: Properties and applications.

Authors:  Ludmila A Kasatkina; Vladislav V Verkhusha
Journal:  Cell Rep       Date:  2022-05-24       Impact factor: 9.995

4.  Live Visualization of ERK Activity in the Mouse Blastocyst Reveals Lineage-Specific Signaling Dynamics.

Authors:  Claire S Simon; Shahadat Rahman; Dhruv Raina; Christian Schröter; Anna-Katerina Hadjantonakis
Journal:  Dev Cell       Date:  2020-10-21       Impact factor: 12.270

Review 5.  MAPK and PI3K signaling: At the crossroads of neural crest development.

Authors:  Colin J Dinsmore; Philippe Soriano
Journal:  Dev Biol       Date:  2018-02-14       Impact factor: 3.582

Review 6.  Imaging dynamic cell signaling in vivo with new classes of fluorescent reporters.

Authors:  Xiaokun Shu
Journal:  Curr Opin Chem Biol       Date:  2019-11-01       Impact factor: 8.822

7.  A Highly Sensitive A-Kinase Activity Reporter for Imaging Neuromodulatory Events in Awake Mice.

Authors:  Lei Ma; Bart C Jongbloets; Wei-Hong Xiong; Joshua B Melander; Maozhen Qin; Tess J Lameyer; Madeleine F Harrison; Boris V Zemelman; Tianyi Mao; Haining Zhong
Journal:  Neuron       Date:  2018-08-09       Impact factor: 17.173

8.  Fragile X Mental Retardation Protein positively regulates PKA anchor Rugose and PKA activity to control actin assembly in learning/memory circuitry.

Authors:  James C Sears; Woong Jae Choi; Kendal Broadie
Journal:  Neurobiol Dis       Date:  2019-02-13       Impact factor: 5.996

9.  Kinase-mediated RAS signaling via membraneless cytoplasmic protein granules.

Authors:  Asmin Tulpule; Juan Guan; Dana S Neel; Hannah R Allegakoen; Yone Phar Lin; David Brown; Yu-Ting Chou; Ann Heslin; Nilanjana Chatterjee; Shriya Perati; Shruti Menon; Tan A Nguyen; Jayanta Debnath; Alejandro D Ramirez; Xiaoyu Shi; Bin Yang; Siyu Feng; Suraj Makhija; Bo Huang; Trever G Bivona
Journal:  Cell       Date:  2021-04-12       Impact factor: 41.582

Review 10.  Genetically encoded sensors towards imaging cAMP and PKA activity in vivo.

Authors:  Crystian I Massengill; Julian Day-Cooney; Tianyi Mao; Haining Zhong
Journal:  J Neurosci Methods       Date:  2021-07-31       Impact factor: 2.987

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