Literature DB >> 29306103

Are natural proteins special? Can we do that?

Michael H Hecht1, Shlomo Zarzhitsky2, Christina Karas2, Sarangan Chari2.   

Abstract

Natural proteins represent a minuscule fraction of possible sequence space. These very rare sequences display remarkable properties: They fold into many different stable structures, and perform a wide range of complex biological functions. These two considerations-rarity and functionality-may suggest that natural proteins are somehow special. Is this true? We address this question by exploring attempts to recapitulate the special structures and functions of natural proteins into sequences designed de novo.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29306103     DOI: 10.1016/j.sbi.2017.11.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  7 in total

1.  De novo metalloprotein design.

Authors:  Matthew J Chalkley; Samuel I Mann; William F DeGrado
Journal:  Nat Rev Chem       Date:  2021-12-06       Impact factor: 34.571

2.  Modern and prebiotic amino acids support distinct structural profiles in proteins.

Authors:  Vyacheslav Tretyachenko; Jiří Vymětal; Tereza Neuwirthová; Jiří Vondrášek; Kosuke Fujishima; Klára Hlouchová
Journal:  Open Biol       Date:  2022-06-22       Impact factor: 7.124

Review 3.  De novo protein design, a retrospective.

Authors:  Ivan V Korendovych; William F DeGrado
Journal:  Q Rev Biophys       Date:  2020-02-11       Impact factor: 5.318

4.  Spectroscopic and metal binding properties of a de novo metalloprotein binding a tetrazinc cluster.

Authors:  Marco Chino; Shao-Qing Zhang; Fabio Pirro; Linda Leone; Ornella Maglio; Angela Lombardi; William F DeGrado
Journal:  Biopolymers       Date:  2018-09-11       Impact factor: 2.505

Review 5.  De novo proteins from random sequences through in vitro evolution.

Authors:  Cher Ling Tong; Kun-Hwa Lee; Burckhard Seelig
Journal:  Curr Opin Struct Biol       Date:  2021-01-28       Impact factor: 7.786

Review 6.  Thawing out frozen metabolic accidents.

Authors:  Dario Leister
Journal:  BMC Biol       Date:  2019-01-30       Impact factor: 7.431

Review 7.  Designing minimalist membrane proteins.

Authors:  Paul Curnow
Journal:  Biochem Soc Trans       Date:  2019-10-31       Impact factor: 5.407

  7 in total

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