Literature DB >> 29298292

Imaging organoids: a bright future ahead.

Anne C Rios1, Hans Clevers2.   

Abstract

Organogenesis, tissue homeostasis and organ function involve complex spatial cellular organization and tissue dynamics. The underlying mechanisms of these processes, and how they are disrupted in disease, are challenging to address in vivo and ethically impossible to study in human. Organoids, three-dimensional (3D) stem cell cultures that self-organize into ex vivo 'mini-organs', now open a new window onto cellular processes within tissue. Light microscopy is a powerful approach to probe the cellular complexity that can be modeled with organoids. This combination of tools is already leading to exciting synergies in stem cell and cancer research.

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Year:  2018        PMID: 29298292     DOI: 10.1038/nmeth.4537

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  18 in total

1.  Functional engraftment of colon epithelium expanded in vitro from a single adult Lgr5⁺ stem cell.

Authors:  Shiro Yui; Tetsuya Nakamura; Toshiro Sato; Yasuhiro Nemoto; Tomohiro Mizutani; Xiu Zheng; Shizuko Ichinose; Takashi Nagaishi; Ryuichi Okamoto; Kiichiro Tsuchiya; Hans Clevers; Mamoru Watanabe
Journal:  Nat Med       Date:  2012-03-11       Impact factor: 53.440

2.  Stepwise differentiation of pluripotent stem cells into retinal cells.

Authors:  Fumitaka Osakada; Hanako Ikeda; Yoshiki Sasai; Masayo Takahashi
Journal:  Nat Protoc       Date:  2009-05-07       Impact factor: 13.491

3.  Multiplex, quantitative cellular analysis in large tissue volumes with clearing-enhanced 3D microscopy (Ce3D).

Authors:  Weizhe Li; Ronald N Germain; Michael Y Gerner
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-14       Impact factor: 11.205

4.  Genetic dissection of colorectal cancer progression by orthotopic transplantation of engineered cancer organoids.

Authors:  Arianna Fumagalli; Jarno Drost; Saskia J E Suijkerbuijk; Ruben van Boxtel; Joep de Ligt; G Johan Offerhaus; Harry Begthel; Evelyne Beerling; Ee Hong Tan; Owen J Sansom; Edwin Cuppen; Hans Clevers; Jacco van Rheenen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-07       Impact factor: 11.205

5.  Derivation of a robust mouse mammary organoid system for studying tissue dynamics.

Authors:  Paul R Jamieson; Johanna F Dekkers; Anne C Rios; Nai Yang Fu; Geoffrey J Lindeman; Jane E Visvader
Journal:  Development       Date:  2016-12-19       Impact factor: 6.868

6.  Characterizing responses to CFTR-modulating drugs using rectal organoids derived from subjects with cystic fibrosis.

Authors:  Johanna F Dekkers; Gitte Berkers; Evelien Kruisselbrink; Annelotte Vonk; Hugo R de Jonge; Hettie M Janssens; Inez Bronsveld; Eduard A van de Graaf; Edward E S Nieuwenhuis; Roderick H J Houwen; Frank P Vleggaar; Johanna C Escher; Yolanda B de Rijke; Christof J Majoor; Harry G M Heijerman; Karin M de Winter-de Groot; Hans Clevers; Cornelis K van der Ent; Jeffrey M Beekman
Journal:  Sci Transl Med       Date:  2016-06-22       Impact factor: 17.956

7.  Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure.

Authors:  Xuyu Qian; Ha Nam Nguyen; Mingxi M Song; Christopher Hadiono; Sarah C Ogden; Christy Hammack; Bing Yao; Gregory R Hamersky; Fadi Jacob; Chun Zhong; Ki-Jun Yoon; William Jeang; Li Lin; Yujing Li; Jai Thakor; Daniel A Berg; Ce Zhang; Eunchai Kang; Michael Chickering; David Nauen; Cheng-Ying Ho; Zhexing Wen; Kimberly M Christian; Pei-Yong Shi; Brady J Maher; Hao Wu; Peng Jin; Hengli Tang; Hongjun Song; Guo-Li Ming
Journal:  Cell       Date:  2016-04-22       Impact factor: 41.582

8.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

9.  Targeting mutant RAS in patient-derived colorectal cancer organoids by combinatorial drug screening.

Authors:  Carla S Verissimo; René M Overmeer; Bas Ponsioen; Jarno Drost; Sander Mertens; Ingrid Verlaan-Klink; Bastiaan van Gerwen; Marieke van der Ven; Marc van de Wetering; David A Egan; René Bernards; Hans Clevers; Johannes L Bos; Hugo J Snippert
Journal:  Elife       Date:  2016-11-15       Impact factor: 8.140

10.  Transplantation of expanded fetal intestinal progenitors contributes to colon regeneration after injury.

Authors:  Robert P Fordham; Shiro Yui; Nicholas R F Hannan; Christoffer Soendergaard; Alison Madgwick; Pawel J Schweiger; Ole H Nielsen; Ludovic Vallier; Roger A Pedersen; Tetsuya Nakamura; Mamoru Watanabe; Kim B Jensen
Journal:  Cell Stem Cell       Date:  2013-10-17       Impact factor: 24.633

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  40 in total

Review 1.  Biophysical nanotools for single-molecule dynamics.

Authors:  Qian Peter Su; Lining Arnold Ju
Journal:  Biophys Rev       Date:  2018-08-18

2.  A Primary Cell and Organoid Platform for Evaluating Pharmacological Responses in Mammary Epithelial Cells.

Authors:  Teneale A Stewart; Felicity M Davis
Journal:  ACS Pharmacol Transl Sci       Date:  2020-01-15

Review 3.  Inner ear organoids: new tools to understand neurosensory cell development, degeneration and regeneration.

Authors:  Marta Roccio; Albert S B Edge
Journal:  Development       Date:  2019-09-02       Impact factor: 6.868

Review 4.  Applications of tumor chip technology.

Authors:  Stephanie J Hachey; Christopher C W Hughes
Journal:  Lab Chip       Date:  2018-09-26       Impact factor: 6.799

Review 5.  Advancing insights into stem cell niche complexities with next-generation technologies.

Authors:  Nicholas Heitman; Nivedita Saxena; Michael Rendl
Journal:  Curr Opin Cell Biol       Date:  2018-07-19       Impact factor: 8.382

Review 6.  Organ-on-a-Chip for Cancer and Immune Organs Modeling.

Authors:  Wujin Sun; Zhimin Luo; Junmin Lee; Han-Jun Kim; KangJu Lee; Peyton Tebon; Yudi Feng; Mehmet R Dokmeci; Shiladitya Sengupta; Ali Khademhosseini
Journal:  Adv Healthc Mater       Date:  2019-01-03       Impact factor: 9.933

7.  Luminescence lifetime imaging of three-dimensional biological objects.

Authors:  Ruslan I Dmitriev; Xavier Intes; Margarida M Barroso
Journal:  J Cell Sci       Date:  2021-05-07       Impact factor: 5.285

Review 8.  Advances in development and application of human organoids.

Authors:  Abhijith Shankaran; Keshava Prasad; Sima Chaudhari; Angela Brand; Kapaettu Satyamoorthy
Journal:  3 Biotech       Date:  2021-05-08       Impact factor: 2.406

Review 9.  The frontier of live tissue imaging across space and time.

Authors:  Qiang Huang; Aliesha Garrett; Shree Bose; Stephanie Blocker; Anne C Rios; Hans Clevers; Xiling Shen
Journal:  Cell Stem Cell       Date:  2021-04-01       Impact factor: 24.633

Review 10.  Cell Tracking for Organoids: Lessons From Developmental Biology.

Authors:  Max A Betjes; Xuan Zheng; Rutger N U Kok; Jeroen S van Zon; Sander J Tans
Journal:  Front Cell Dev Biol       Date:  2021-06-03
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