Literature DB >> 29298092

The Integrity and Yield of Genomic DNA Isolated from Whole Blood Following Long-Term Storage at -30°C.

Wenlong Carl Chen1,2,3, Robyn Kerr3,4, Andrew May3,4, Babongile Ndlovu1, Anelisa Sobalisa1,4, Sanelisiwe T Duze1,5, Lavania Joseph1, Christopher G Mathew2,6, Chantal Babb de Villiers3,7.   

Abstract

Long-term storage of whole blood can affect the integrity of DNA if it is not done under optimal conditions. The aim of this study was to determine whether long-term storage (2-19 years) of whole blood samples at -30°C had a negative effect on the quality or quantity of genomic DNA that could be recovered at extraction. Genomic DNA was isolated from 2758 whole blood samples collected in 4 mL EDTA vacutainers from 1997 to 2012. DNA was extracted using the Qiagen® FlexiGene® DNA kit. The average storage duration at -30°C was 12 years. The quality and quantity of the isolated DNA were assessed using spectrophotometry (NanoDrop™), a fluorometric assay for double-stranded DNA (Qubit™), and agarose gel electrophoresis. The mean DNA yield per sample was found to be 114 μg from whole blood volumes that ranged from 0.5 to 4 mL. The mean A260/280 ratio and median A260/280 ratios were both 1.8. No correlation was found between the duration of storage and the total yield or the quality of DNA extracted. These data suggest that high-quality DNA can be extracted from whole blood samples that are stored at -30°C for up to 19 years.

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Keywords:  DNA quality; DNA storage; long-term storage

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Year:  2018        PMID: 29298092     DOI: 10.1089/bio.2017.0050

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  2 in total

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Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2018-07-19       Impact factor: 3.619

2.  Association of genetic variants in CHEK2 with oesophageal squamous cell carcinoma in the South African Black population.

Authors:  Wenlong C Chen; Hannah Bye; Marco Matejcic; Ariella Amar; Dhiren Govender; Yee Wen Khew; Victoria Beynon; Robyn Kerr; Elvira Singh; Natalie J Prescott; Cathryn M Lewis; Chantal Babb de Villiers; M Iqbal Parker; Christopher G Mathew
Journal:  Carcinogenesis       Date:  2019-06-10       Impact factor: 4.944

  2 in total

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