Literature DB >> 29296016

Systematic heterogenization for better reproducibility in animal experimentation.

S Helene Richter1.   

Abstract

The scientific literature is full of articles discussing poor reproducibility of findings from animal experiments as well as failures to translate results from preclinical animal studies to clinical trials in humans. Critics even go so far as to talk about a "reproducibility crisis" in the life sciences, a novel headword that increasingly finds its way into numerous high-impact journals. Viewed from a cynical perspective, Fett's law of the lab "Never replicate a successful experiment" has thus taken on a completely new meaning. So far, poor reproducibility and translational failures in animal experimentation have mostly been attributed to biased animal data, methodological pitfalls, current publication ethics and animal welfare constraints. More recently, the concept of standardization has also been identified as a potential source of these problems. By reducing within-experiment variation, rigorous standardization regimes limit the inference to the specific experimental conditions. In this way, however, individual phenotypic plasticity is largely neglected, resulting in statistically significant but possibly irrelevant findings that are not reproducible under slightly different conditions. By contrast, systematic heterogenization has been proposed as a concept to improve representativeness of study populations, contributing to improved external validity and hence improved reproducibility. While some first heterogenization studies are indeed very promising, it is still not clear how this approach can be transferred into practice in a logistically feasible and effective way. Thus, further research is needed to explore different heterogenization strategies as well as alternative routes toward better reproducibility in animal experimentation.

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Mesh:

Year:  2017        PMID: 29296016     DOI: 10.1038/laban.1330

Source DB:  PubMed          Journal:  Lab Anim (NY)        ISSN: 0093-7355            Impact factor:   12.625


  79 in total

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3.  Reliability, robustness, and reproducibility in mouse behavioral phenotyping: a cross-laboratory study.

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Journal:  Lab Anim       Date:  1997-04       Impact factor: 2.471

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Journal:  PLoS Med       Date:  2010-03-30       Impact factor: 11.069

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

Review 9.  Animal models of behavioral dysfunctions: basic concepts and classifications, and an evaluation strategy.

Authors:  F Josef van der Staay
Journal:  Brain Res Rev       Date:  2006-03-10

10.  Risk of Bias in Reports of In Vivo Research: A Focus for Improvement.

Authors:  Malcolm R Macleod; Aaron Lawson McLean; Aikaterini Kyriakopoulou; Stylianos Serghiou; Arno de Wilde; Nicki Sherratt; Theo Hirst; Rachel Hemblade; Zsanett Bahor; Cristina Nunes-Fonseca; Aparna Potluru; Andrew Thomson; Julija Baginskaite; Julija Baginskitae; Kieren Egan; Hanna Vesterinen; Gillian L Currie; Leonid Churilov; David W Howells; Emily S Sena
Journal:  PLoS Biol       Date:  2015-10-13       Impact factor: 8.029

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  15 in total

1.  Comparative Analysis of the Pharmacological Activity of Bis(3,5-di-Tert-Butyl-4-Hydroxyphenylthiolate)Dimethylol in Different Modes of Administration on a Mouse Model of Melanoma B16 Tumor Growth.

Authors:  M A Dodokhova; I M Kotieva; A V Safronenko; M S Alkhusein-Kulyaginova; N V Sukhorukova; V M Kotieva; E M Kotieva; S I Starostin; D B Shpakovsky; E A Nikitin; E R Milaeva
Journal:  Bull Exp Biol Med       Date:  2022-10-10       Impact factor: 0.737

2.  Engineering Intravenously Administered Nanoparticles to Reduce Infusion Reaction and Stop Bleeding in a Large Animal Model of Trauma.

Authors:  Chimdiya Onwukwe; Nuzhat Maisha; Mark Holland; Matt Varley; Rebecca Groynom; DaShawn Hickman; Nishant Uppal; Andrew Shoffstall; Jeffrey Ustin; Erin Lavik
Journal:  Bioconjug Chem       Date:  2018-07-09       Impact factor: 4.774

3.  Reinstatement of contextual conditioned anxiety in virtual reality and the effects of transcutaneous vagus nerve stimulation in humans.

Authors:  Hannah Genheimer; Marta Andreatta; Esther Asan; Paul Pauli
Journal:  Sci Rep       Date:  2017-12-20       Impact factor: 4.379

Review 4.  Rethinking animal models of sepsis - working towards improved clinical translation whilst integrating the 3Rs.

Authors:  Manasi Nandi; Simon K Jackson; Duncan Macrae; Manu Shankar-Hari; Jordi L Tremoleda; Elliot Lilley
Journal:  Clin Sci (Lond)       Date:  2020-07-17       Impact factor: 6.124

5.  The Crisis of Reproducibility, the Denominator Problem and the Scientific Role of Multi-scale Modeling.

Authors:  Gary An
Journal:  Bull Math Biol       Date:  2018-09-07       Impact factor: 1.758

6.  Heterogenising study samples across testing time improves reproducibility of behavioural data.

Authors:  Carina Bodden; Vanessa Tabea von Kortzfleisch; Fabian Karwinkel; Sylvia Kaiser; Norbert Sachser; S Helene Richter
Journal:  Sci Rep       Date:  2019-06-03       Impact factor: 4.379

7.  Fundamental Concepts for Semiquantitative Tissue Scoring in Translational Research.

Authors:  David K Meyerholz; Amanda P Beck
Journal:  ILAR J       Date:  2018-12-01

8.  Experimental replications in animal trials.

Authors:  Florian Frommlet; Georg Heinze
Journal:  Lab Anim       Date:  2020-03-05       Impact factor: 2.471

9.  Mapping the past, present and future research landscape of paternal effects.

Authors:  Joanna Rutkowska; Malgorzata Lagisz; Russell Bonduriansky; Shinichi Nakagawa
Journal:  BMC Biol       Date:  2020-11-27       Impact factor: 7.431

10.  Improving reproducibility in animal research by splitting the study population into several 'mini-experiments'.

Authors:  Vanessa Tabea von Kortzfleisch; Natasha A Karp; Rupert Palme; Sylvia Kaiser; Norbert Sachser; S Helene Richter
Journal:  Sci Rep       Date:  2020-10-06       Impact factor: 4.379

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