Literature DB >> 29294023

In silico VHL Gene Mutation Analysis and Prognosis of Pancreatic Neuroendocrine Tumors in von Hippel-Lindau Disease.

Amit Tirosh1,2, Mustapha El Lakis1, Patience Green1, Pavel Nockel1, Dhaval Patel1, Naris Nilubol1, Sudheer Kumar Gara1, Xavier M Keutgen1,3, W Marston Linehan4, Electron Kebebew1,5.   

Abstract

Context: Patients with von Hippel-Lindau (vHL) disease caused by a missense VHL mutation have a more severe phenotype compared with other VHL mutation types. Objective: To define pancreatic neuroendocrine tumor (PNET) aggressiveness according to VHL genotype. Design: A prospective natural history study. Setting: The National Institutes of Health clinical center. Patients: Patients with vHL disease, pancreatic manifestations, and germline missense VHL gene mutations. Intervention: In-silico prediction of VHL mutation via five computational prediction models. Patients with >80% prediction for disease-causing mutations in all models [high predicted risk (HPR)] were compared with others [low predicted risk (LPR)]. Main Outcome Measure: Rates of metastases, surgical intervention, and disease progression.
Results: Sixty-nine patients were included: 2 developed metastases, 12 needed surgery, and 31 had disease progression during a median follow-up of 60 months (range 13 to 84 months). Thirteen patients were excluded for low prediction reliability. In the remaining 56 patients (45 with PNETs, 11 with pancreatic cysts), the HPR group (n = 13) had a higher rate of disease progression than the LPR group (n = 43) in multivariable analysis (hazard ratio 3.6; 95% confidence interval, 1.1 to 11.9; P = 0.037). The HPR group also had a higher risk of developing metastases (P = 0.015). Among patients with codon 167 hotspot mutations (n = 26), those in the HPR group had a higher risk for disease progression (P = 0.03) than other patients. Conclusions: Computational models for predicting the impact of missense VHL gene mutations may be used as a prognostic factor in patients with PNETs in the context of vHL disease.

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Year:  2018        PMID: 29294023      PMCID: PMC6276699          DOI: 10.1210/jc.2017-02434

Source DB:  PubMed          Journal:  J Clin Endocrinol Metab        ISSN: 0021-972X            Impact factor:   5.958


  40 in total

1.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

2.  HIFalpha targeted for VHL-mediated destruction by proline hydroxylation: implications for O2 sensing.

Authors:  M Ivan; K Kondo; H Yang; W Kim; J Valiando; M Ohh; A Salic; J M Asara; W S Lane; W G Kaelin
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

3.  Association of type O blood with pancreatic neuroendocrine tumors in Von Hippel-Lindau syndrome.

Authors:  Allison B Weisbrod; David J Liewehr; Seth M Steinberg; Erin E Patterson; Steven K Libutti; W Marston Linehan; Naris Nilubol; Electron Kebebew
Journal:  Ann Surg Oncol       Date:  2012-02-16       Impact factor: 5.344

4.  Improved detection of germline mutations in the von Hippel-Lindau disease tumor suppressor gene.

Authors:  C Stolle; G Glenn; B Zbar; J S Humphrey; P Choyke; M Walther; S Pack; K Hurley; C Andrey; R Klausner; W M Linehan
Journal:  Hum Mutat       Date:  1998       Impact factor: 4.878

5.  Specific Localization of Missense Mutations in the VHL Gene in Clear Cell Renal Cell Carcinoma.

Authors:  D S Mikhailenko; T A Zhinzhilo; A V Kolpakov; T V Kekeeva; V V Strel'nikov; M V Nemtsova; N E Kushlinskii
Journal:  Bull Exp Biol Med       Date:  2017-08-29       Impact factor: 0.804

6.  Structure of the VHL-ElonginC-ElonginB complex: implications for VHL tumor suppressor function.

Authors:  C E Stebbins; W G Kaelin; N P Pavletich
Journal:  Science       Date:  1999-04-16       Impact factor: 47.728

7.  Von Hippel-Lindau disease: a genetic study.

Authors:  E R Maher; L Iselius; J R Yates; M Littler; C Benjamin; R Harris; J Sampson; A Williams; M A Ferguson-Smith; N Morton
Journal:  J Med Genet       Date:  1991-07       Impact factor: 6.318

Review 8.  von Hippel-Lindau disease.

Authors:  Russell R Lonser; Gladys M Glenn; McClellan Walther; Emily Y Chew; Steven K Libutti; W Marston Linehan; Edward H Oldfield
Journal:  Lancet       Date:  2003-06-14       Impact factor: 79.321

9.  Association of VHL Genotype With Pancreatic Neuroendocrine Tumor Phenotype in Patients With von Hippel-Lindau Disease.

Authors:  Amit Tirosh; Samira M Sadowski; W Marston Linehan; Steven K Libutti; Dhaval Patel; Naris Nilubol; Electron Kebebew
Journal:  JAMA Oncol       Date:  2018-01-01       Impact factor: 31.777

10.  Comparison of predicted and actual consequences of missense mutations.

Authors:  Lisa A Miosge; Matthew A Field; Yovina Sontani; Vicky Cho; Simon Johnson; Anna Palkova; Bhavani Balakishnan; Rong Liang; Yafei Zhang; Stephen Lyon; Bruce Beutler; Belinda Whittle; Edward M Bertram; Anselm Enders; Christopher C Goodnow; T Daniel Andrews
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-12       Impact factor: 11.205

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  5 in total

1.  Distinct genome-wide methylation patterns in sporadic and hereditary nonfunctioning pancreatic neuroendocrine tumors.

Authors:  Amit Tirosh; Sanjit Mukherjee; Justin Lack; Sudheer Kumar Gara; Sophie Wang; Martha M Quezado; Xavier M Keutgen; Xiaolin Wu; Maggie Cam; Suresh Kumar; Dhaval Patel; Naris Nilubol; Monica Varun Tyagi; Electron Kebebew
Journal:  Cancer       Date:  2019-01-08       Impact factor: 6.860

2.  Large scale genotype- and phenotype-driven machine learning in Von Hippel-Lindau disease.

Authors:  Andreea Chiorean; Kirsten M Farncombe; Sean Delong; Veronica Andric; Safa Ansar; Clarissa Chan; Kaitlin Clark; Arpad M Danos; Yizhuo Gao; Rachel H Giles; Anna Goldenberg; Payal Jani; Kilannin Krysiak; Lynzey Kujan; Samantha Macpherson; Eamonn R Maher; Liam G McCoy; Yasser Salama; Jason Saliba; Lana Sheta; Malachi Griffith; Obi L Griffith; Lauren Erdman; Arun Ramani; Raymond H Kim
Journal:  Hum Mutat       Date:  2022-05-10       Impact factor: 4.700

Review 3.  Genetic testing in endocrine surgery: Opportunities for precision surgery.

Authors:  Wilson Alobuia; Justin Annes; Electron Kebebew
Journal:  Surgery       Date:  2020-05-04       Impact factor: 3.982

Review 4.  Phakomatoses and Endocrine Gland Tumors: Noteworthy and (Not so) Rare Associations.

Authors:  Benjamin Chevalier; Hippolyte Dupuis; Arnaud Jannin; Madleen Lemaitre; Christine Do Cao; Catherine Cardot-Bauters; Stéphanie Espiard; Marie Christine Vantyghem
Journal:  Front Endocrinol (Lausanne)       Date:  2021-05-06       Impact factor: 5.555

5.  Identification of a VHL gene mutation in atypical Von Hippel-Lindau syndrome: genotype-phenotype correlation and gene therapy perspective.

Authors:  Dali Tong; Yao Zhang; Jun Jiang; Gang Bi
Journal:  Cancer Cell Int       Date:  2021-12-19       Impact factor: 5.722

  5 in total

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