Literature DB >> 29286376

In Vitro and In Vivo Detection of Mitophagy in Human Cells, C. Elegans, and Mice.

Evandro F Fang1, Konstantinos Palikaras2, Nuo Sun3, Elayne M Fivenson4, Ryan D Spangler5, Jesse S Kerr4, Stephanie A Cordonnier4, Yujun Hou4, Eszter Dombi6, Henok Kassahun7, Nektarios Tavernarakis8, Joanna Poulton6, Hilde Nilsen7, Vilhelm A Bohr9.   

Abstract

Mitochondria are the powerhouses of cells and produce cellular energy in the form of ATP. Mitochondrial dysfunction contributes to biological aging and a wide variety of disorders including metabolic diseases, premature aging syndromes, and neurodegenerative diseases such as Alzheimer's disease (AD) and Parkinson's disease (PD). Maintenance of mitochondrial health depends on mitochondrial biogenesis and the efficient clearance of dysfunctional mitochondria through mitophagy. Experimental methods to accurately detect autophagy/mitophagy, especially in animal models, have been challenging to develop. Recent progress towards the understanding of the molecular mechanisms of mitophagy has enabled the development of novel mitophagy detection techniques. Here, we introduce several versatile techniques to monitor mitophagy in human cells, Caenorhabditis elegans (e.g., Rosella and DCT-1/ LGG-1 strains), and mice (mt-Keima). A combination of these mitophagy detection techniques, including cross-species evaluation, will improve the accuracy of mitophagy measurements and lead to a better understanding of the role of mitophagy in health and disease.

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Year:  2017        PMID: 29286376      PMCID: PMC5755444          DOI: 10.3791/56301

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  24 in total

Review 1.  Mitophagy and Alzheimer's Disease: Cellular and Molecular Mechanisms.

Authors:  Jesse S Kerr; Bryan A Adriaanse; Nigel H Greig; Mark P Mattson; M Zameel Cader; Vilhelm A Bohr; Evandro F Fang
Journal:  Trends Neurosci       Date:  2017-02-09       Impact factor: 13.837

2.  A fluorescence-based imaging method to measure in vitro and in vivo mitophagy using mt-Keima.

Authors:  Nuo Sun; Daniela Malide; Jie Liu; Ilsa I Rovira; Christian A Combs; Toren Finkel
Journal:  Nat Protoc       Date:  2017-07-13       Impact factor: 13.491

3.  Coordination of mitophagy and mitochondrial biogenesis during ageing in C. elegans.

Authors:  Konstantinos Palikaras; Eirini Lionaki; Nektarios Tavernarakis
Journal:  Nature       Date:  2015-04-20       Impact factor: 49.962

4.  Iron-Starvation-Induced Mitophagy Mediates Lifespan Extension upon Mitochondrial Stress in C. elegans.

Authors:  Alfonso Schiavi; Silvia Maglioni; Konstantinos Palikaras; Anjumara Shaik; Flavie Strappazzon; Vanessa Brinkmann; Alessandro Torgovnick; Natascha Castelein; Sasha De Henau; Bart P Braeckman; Francesco Cecconi; Nektarios Tavernarakis; Natascia Ventura
Journal:  Curr Biol       Date:  2015-07-02       Impact factor: 10.834

5.  Defective mitophagy in XPA via PARP-1 hyperactivation and NAD(+)/SIRT1 reduction.

Authors:  Evandro Fei Fang; Morten Scheibye-Knudsen; Lear E Brace; Henok Kassahun; Tanima SenGupta; Hilde Nilsen; James R Mitchell; Deborah L Croteau; Vilhelm A Bohr
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

Review 6.  Mitochondrial ROS signaling in organismal homeostasis.

Authors:  Gerald S Shadel; Tamas L Horvath
Journal:  Cell       Date:  2015-10-22       Impact factor: 41.582

7.  Rosella: a fluorescent pH-biosensor for reporting vacuolar turnover of cytosol and organelles in yeast.

Authors:  Carlos J Rosado; Dalibor Mijaljica; Irene Hatzinisiriou; Mark Prescott; Rodney J Devenish
Journal:  Autophagy       Date:  2007-11-21       Impact factor: 16.016

Review 8.  Mechanisms of autophagosome biogenesis.

Authors:  David C Rubinsztein; Tomer Shpilka; Zvulun Elazar
Journal:  Curr Biol       Date:  2012-01-10       Impact factor: 10.834

9.  Rapid parallel measurements of macroautophagy and mitophagy in mammalian cells using a single fluorescent biosensor.

Authors:  A Sargsyan; J Cai; L B Fandino; M E Labasky; T Forostyan; L K Colosimo; S J Thompson; T E Graham
Journal:  Sci Rep       Date:  2015-07-28       Impact factor: 4.379

10.  mito-QC illuminates mitophagy and mitochondrial architecture in vivo.

Authors:  Thomas G McWilliams; Alan R Prescott; George F G Allen; Jevgenia Tamjar; Michael J Munson; Calum Thomson; Miratul M K Muqit; Ian G Ganley
Journal:  J Cell Biol       Date:  2016-07-25       Impact factor: 10.539

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  5 in total

1.  Sensitive Measurement of Mitophagy by Flow Cytometry Using the pH-dependent Fluorescent Reporter mt-Keima.

Authors:  Jee-Hyun Um; Young Yeon Kim; Toren Finkel; Jeanho Yun
Journal:  J Vis Exp       Date:  2018-08-12       Impact factor: 1.355

2.  Quantification of mitophagy using mKeima-mito in cultured human primary retinal pigment epithelial cells.

Authors:  Cody R Fisher; Mara C Ebeling; Deborah A Ferrington
Journal:  Exp Eye Res       Date:  2022-02-12       Impact factor: 3.467

Review 3.  Insights Into the Role of Mitochondria in Vascular Calcification.

Authors:  Z L Zeng; Qing Yuan; Xuyu Zu; Jianghua Liu
Journal:  Front Cardiovasc Med       Date:  2022-04-29

4.  Metabolic dysfunction in human skin: Restoration of mitochondrial integrity and metabolic output by nicotinamide (niacinamide) in primary dermal fibroblasts from older aged donors.

Authors:  John E Oblong; Amy Bowman; Holly A Rovito; Bradley B Jarrold; Joseph D Sherrill; Markaisa R Black; Glyn Nelson; Alexa B Kimball; Mark A Birch-Machin
Journal:  Aging Cell       Date:  2020-09-29       Impact factor: 9.304

Review 5.  Delineating the Role of Mitophagy Inducers for Alzheimer Disease Patients.

Authors:  Wen-Wen Wang; Ruiyu Han; Hai-Jun He; Zhen Wang; Xiao-Qian Luan; Jia Li; Liang Feng; Si-Yan Chen; Yahyah Aman; Cheng-Long Xie
Journal:  Aging Dis       Date:  2021-06-01       Impact factor: 6.745

  5 in total

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