| Literature DB >> 29285737 |
Jun Chen1, Hong Wang2, Zhiming Li3.
Abstract
Emerging evidences have shown that common genetic polymorphisms in X-ray repair cross complementing group 1 (XRCC1) gene may be associated with the development of pancreatic cancer, but individually published studies and previous meta-analyses revealed inconclusive results. The aim of our study was to investigate the association between polymorphisms in XRCC1 gene and pancreatic cancer risk. We conducted a search of PubMed, Embase, the Cochrane Library and Web of Science databases. Odds ratios (ORs) with 95% confidence intervals (CIs) were determined as measures of the strength of association between polymorphisms of XRCC1 and pancreatic cancer risk. Sensitivity analysis and publication bias were evaluated. All analyses were undertaken using the STATA 13.0. A total of 10 studies were included in this systematic review. Five common functional single-nucleotide polymorphisms (SNPs) in XRCC1 gene were found, including Arg399Gln G > A (rs25487), Arg194Trp C > T (rs1799782), Arg280His G > A (rs25489), c.1517G > C, c.1471G > A. Results from our stratified analysis based on Hardy-Weinberg equilibrium (HWE) showed that there was a robust significant association between Arg280His polymorphism and pancreatic cancer risk (allelic model, OR 0.743, 95% CI 0.576-0.958, P = 0.022; heterozygous model, OR 0.701, 95% CI 0.525-0.936, P = 0.016; dominant model, OR 0.710, 95% CI 0.537-0.939, P = 0.016). We also found a statistically significant association between c.1517G > C polymorphism and pancreatic cancer risk (Allelic model, OR 1.252, 95% CI 1.064-1.473, P = 0.007). No significant results were obtained for Arg399Gln, Arg194Trp and c.1471G > A polymorphisms. The present meta-analysis suggested that Arg280His and c.1517G > C polymorphisms in XRCC1 gene were associated with pancreatic cancer risk.Entities:
Keywords: Meta-analysis; Pancreatic cancer; Polymorphisms; XRCC1
Mesh:
Substances:
Year: 2017 PMID: 29285737 PMCID: PMC6614153 DOI: 10.1007/s12253-017-0364-6
Source DB: PubMed Journal: Pathol Oncol Res ISSN: 1219-4956 Impact factor: 3.201
Fig. 1Flowchart of study selection
Characteristics of studies included in the meta-analysis
| Study | Year | Country | Ethnicity | Genotyping method | Sample size | SNP | |
|---|---|---|---|---|---|---|---|
| Cases | Controls | ||||||
| Wang LJ | 2016 | China | Asians | PCR-RFLP | 152 | 264 | Arg399Gln; Arg280His; Arg194Trp |
| Hou BH | 2016 | China | Asians | PCR-RFLP | 298 | 298 | Arg399Gln; Arg280His; Arg194Trp; c.1517G > C; c.1471G > A |
| Zhao ZM | 2014 | China | Asians | PCR-RFLP | 390 | 392 | c.1517G > C |
| Yan D | 2013 | China | Asians | SNaPshot | 210 | 213 | Arg399Gln; Arg194Trp |
| Chen H | 2013 | China | Asians | CRS-PCR | 328 | 350 | c.1471G > A |
| Nakao M | 2013 | Japan | Asians | TaqMan | 185 | 1465 | Arg399Gln; Arg194Trp |
| Mcwilliams RR | 2008 | USA | Caucasians | PCR | 481 | 625 | Arg399Gln; Arg280His; Arg194Trp |
| Wang L | 2006 | China | Asians | PCR | 101 | 337 | Arg399Gln; Arg194Trp |
| Jiao L | 2006 | USA | Caucasians | PCR | 384 | 357 | Arg399Gln; Arg194Trp |
| Duell EJ | 2002 | USA | Caucasians | PCR-RFLP | 261 | 860 | Arg399Gln |
| Duell EJ | 2002 | USA | Asians | PCR-RFLP | 17 | 53 | Arg399Gln |
PCR, polymerase chain reaction; RFLP, restriction fragment length polymorphism; CRS-PCR, created restriction site-PCR; SNP, single nucleotide polymorphism
Main results on association between XRCC1 gene polymorphisms and pancreatic cancer risk
| Comparisons | No. of Studies | Test of association | Analysis model | Test of heterogeneity | ||||
|---|---|---|---|---|---|---|---|---|
| OR | 95% CI |
| χ2 |
| I2 (%) | |||
| XRCC1 gene Arg399Gln polymorphism in total populations | ||||||||
| Allelic (A versus G) | 9 | 1.111 | 0.954–1.293 | 0.177 | Random | 22.70 | 0.004 | 64.8% |
| Heterozygous (GA versus GG) | 9 | 1.083 | 0.961–1.220 | 0.190 | Fixed | 12.33 | 0.137 | 35.1% |
| Homozygous (AA versus GG) | 9 | 1.212 | 0.906–1.620 | 0.195 | Random | 16.18 | 0.040 | 50.5% |
| Dominant (AA + GA versus GG) | 9 | 1.123 | 0.939–1.342 | 0.204 | Random | 18.16 | 0.020 | 55.9% |
| Recessive (AA versus GA + GG) | 9 | 1.135 | 0.950–1.356 | 0.162 | Fixed | 11.44 | 0.178 | 30.1% |
| XRCC1 gene Arg399Gln polymorphism in HWE | ||||||||
| Allelic (A versus G) | 8 | 1.065 | 0.921–1.230 | 0.396 | Random | 16.38 | 0.022 | 57.3% |
| Heterozygous (GA versus GG) | 8 | 1.063 | 0.939–1.203 | 0.335 | Fixed | 11.13 | 0.133 | 37.1% |
| Homozygous (AA versus GG) | 8 | 1.089 | 0.893–1.327 | 0.400 | Fixed | 10.96 | 0.140 | 36.1% |
| Dominant (AA + GA versus GG) | 8 | 1.080 | 0.902–1.292 | 0.405 | Random | 14.79 | 0.039 | 52.7% |
| Recessive (AA versus GA + GG) | 8 | 1.070 | 0.887–1.290 | 0.481 | Fixed | 7.23 | 0.405 | 3.2% |
| XRCC1 gene Arg399Gln polymorphism in Asian populations | ||||||||
| Allelic (A versus G) | 6 | 1.155 | 0.900–1.483 | 0.256 | Random | 16.81 | 0.005 | 70.2% |
| Heterozygous (GA versus GG) | 6 | 1.166 | 0.985–1.382 | 0.075 | Fixed | 7.11 | 0.213 | 29.7% |
| Homozygous (AA versus GG) | 6 | 1.303 | 0.784–2.165 | 0.307 | Random | 12.42 | 0.029 | 59.7% |
| Dominant (AA + GA versus GG) | 6 | 1.180 | 0.906–1.537 | 0.219 | Random | 12.01 | 0.035 | 58.4% |
| Recessive (AA versus GA + GG) | 6 | 1.269 | 0.950–1.695 | 0.106 | Fixed | 9.61 | 0.087 | 48.0% |
| XRCC1 gene Arg399Gln polymorphism in Caucasians populations | ||||||||
| Allelic (A versus G) | 3 | 1.027 | 0.917–1.151 | 0.643 | Fixed | 3.47 | 0.177 | 42.3% |
| Heterozygous (GA versus GG) | 3 | 1.007 | 0.852–1.191 | 0.932 | Fixed | 3.74 | 0.154 | 46.5% |
| Homozygous (AA versus GG) | 3 | 1.066 | 0.836–1.358 | 0.607 | Fixed | 2.09 | 0.352 | 4.3% |
| Dominant (AA + GA versus GG) | 3 | 1.038 | 0.823–1.309 | 0.753 | Random | 4.24 | 0.120 | 52.9% |
| Recessive (AA versus GA + GG) | 3 | 1.063 | 0.849–1.331 | 0.596 | Fixed | 0.79 | 0.673 | 0.0% |
| XRCC1 gene Arg194Trp polymorphism in total populations | ||||||||
| Allelic (T versus C) | 7 | 1.223 | 0.939–1.592 | 0.136 | Random | 28.88 | 0.000 | 79.2% |
| Heterozygous (CT versus CC) | 7 | 1.229 | 0.881–1.713 | 0.225 | Random | 29.30 | 0.000 | 79.5% |
| Homozygous (TT versus CC) | 7 | 1.140 | 0.832–1.563 | 0.414 | Fixed | 4.83 | 0.565 | 0.0% |
| Dominant (TT + CT versus CC) | 7 | 1.247 | 0.900–1.726 | 0.184 | Random | 30.46 | 0.000 | 80.3% |
| Recessive (TT versus CT + CC) | 7 | 1.130 | 0.831–1.534 | 0.436 | Fixed | 3.33 | 0.767 | 0.0% |
| XRCC1 gene Arg194Trp polymorphism in HWE | ||||||||
| Allelic (T versus C) | 5 | 1.315 | 0.927–1.865 | 0.125 | Random | 23.28 | 0.000 | 82.8% |
| Heterozygous (CT versus CC) | 5 | 1.390 | 0.919–2.103 | 0.118 | Random | 21.52 | 0.000 | 81.4% |
| Homozygous (TT versus CC) | 5 | 1.113 | 0.758–1.635 | 0.583 | Fixed | 3.46 | 0.483 | 0.0% |
| Dominant (TT + CT versus CC) | 5 | 1.387 | 0.918–2.098 | 0.121 | Random | 22.99 | 0.000 | 82.6% |
| Recessive (TT versus CT + CC) | 5 | 1.065 | 0.733–1.546 | 0.743 | Fixed | 2.21 | 0.698 | 0.0% |
| XRCC1 gene Arg194Trp polymorphism in Asian populations | ||||||||
| Allelic (T versus C) | 5 | 1.080 | 0.875–1.332 | 0.475 | Random | 9.72 | 0.045 | 58.8% |
| Heterozygous (CT versus CC) | 5 | 1.048 | 0.809–1.357 | 0.723 | Random | 8.55 | 0.073 | 53.2% |
| Homozygous (TT versus CC) | 5 | 1.105 | 0.798–1.532 | 0.547 | Fixed | 4.05 | 0.400 | 1.2% |
| Dominant (TT + CT versus CC) | 5 | 1.075 | 0.824–1.401 | 0.595 | Random | 9.92 | 0.042 | 59.7% |
| Recessive (TT versus CT + CC) | 5 | 1.104 | 0.805–1.516 | 0.539 | Fixed | 2.92 | 0.572 | 0.0% |
| XRCC1 gene Arg194Trp polymorphism in Caucasians populations | ||||||||
| Allelic (T versus C) | 2 | 1.707 | 0.646–4.512 | 0.281 | Random | 12.84 | 0.000 | 92.2% |
| Heterozygous (CT versus CC) | 2 | 1.840 | 0.587–5.768 | 0.295 | Random | 14.56 | 0.000 | 93.1% |
| Homozygous (TT versus CC) | 2 | 1.815 | 0.521–6.321 | 0.349 | Fixed | 0.20 | 0.656 | 0.0% |
| Dominant (TT + CT versus CC) | 2 | 1.825 | 0.600–5.546 | 0.289 | Random | 14.46 | 0.000 | 93.1% |
| Recessive (TT versus CT + CC) | 2 | 1.607 | 0.463–5.584 | 0.455 | Random | 0.08 | 0.775 | 0.0% |
| XRCC1 gene Arg280His polymorphism in total populations | ||||||||
| Allelic (A versus G) | 3 | 0.956 | 0.589–1.550 | 0.854 | Random | 8.40 | 0.015 | 76.2% |
| Heterozygous (GA versus GG) | 3 | 0.772 | 0.592–1.008 | 0.057 | Fixed | 2.97 | 0.227 | 32.6% |
| Homozygous (AA versus GG) | 3 | 1.216 | 0.630–2.349 | 0.560 | Fixed | 3.60 | 0.165 | 44.5% |
| Dominant (AA + GA versus GG) | 3 | 0.885 | 0.565–1.385 | 0.592 | Random | 5.86 | 0.053 | 65.9% |
| Recessive (AA versus GA + GG) | 3 | 1.261 | 0.653–2.432 | 0.490 | Fixed | 3.07 | 0.215 | 34.9% |
| XRCC1 gene Arg280His polymorphism in HWE | ||||||||
| Allelic (A versus G) | 2 | 0.743 | 0.576–0.958 | 0.022 | Fixed | 0.04 | 0.833 | 0.0% |
| Heterozygous (GA versus GG) | 2 | 0.701 | 0.525–0.936 | 0.016 | Fixed | 0.00 | 0.996 | 0.0% |
| Homozygous (AA versus GG) | 2 | 0.794 | 0.339–1.859 | 0.595 | Fixed | 0.98 | 0.322 | 0.0% |
| Dominant (AA + GA versus GG) | 2 | 0.710 | 0.537–0.939 | 0.016 | Fixed | 0.03 | 0.873 | 0.0% |
| Recessive (AA versus GA + GG) | 2 | 0.856 | 0.367–1.999 | 0.720 | Fixed | 0.90 | 0.342 | 0.0% |
| XRCC1 gene c.1517G > C polymorphism in total populations | ||||||||
| Allelic (C versus G) | 2 | 1.252 | 1.064–1.473 | 0.007 | Fixed | 0.52 | 0.471 | 0.0% |
| Heterozygous (GC versus GG) | 2 | 1.025 | 0.786–1.335 | 0.858 | Fixed | 0.01 | 0.903 | 0.0% |
| Homozygous (CC versus GG) | 2 | 1.800 | 0.976–3.322 | 0.060 | Random | 2.41 | 0.120 | 58.6% |
| Dominant (CC + GC versus GG) | 2 | 1.187 | 0.924–1.526 | 0.180 | Fixed | 0.00 | 0.973 | 0.0% |
| Recessive (CC versus GC + GG) | 2 | 1.677 | 0.876–3.211 | 0.119 | Random | 4.63 | 0.031 | 78.4% |
| XRCC1 gene c.1471G > A polymorphism in total populations | ||||||||
| Allelic (A versus G) | 2 | 0.914 | 0.467–1.789 | 0.794 | Random | 15.61 | 0.000 | 93.6% |
| Heterozygous (GA versus GG) | 2 | 0.948 | 0.547–1.641 | 0.848 | Random | 5.51 | 0.019 | 81.9% |
| Homozygous (AA versus GG) | 2 | 0.860 | 0.210–3.513 | 0.833 | Random | 12.31 | 0.000 | 91.9% |
| Dominant (AA + GA versus GG) | 2 | 0.915 | 0.444–1.886 | 0.810 | Random | 10.66 | 0.001 | 90.6% |
| Recessive (AA versus GA + GG) | 2 | 0.879 | 0.277–2.789 | 0.827 | Random | 8.92 | 0.003 | 88.8% |
Results of publication bias by Egger’s linear regression test for the Arg399Gln polymorphism
| Egger’s test | A versus G | GA versus GG | AA versus GG | AA + GA versus GG | AA versus GA + GG |
|---|---|---|---|---|---|
| t | 0.34 | 0.06 | 0.25 | 0.19 | 0.23 |
| 0.746 | 0.955 | 0.812 | 0.854 | 0.824 |