Literature DB >> 29279408

Control on rate and pathway of anaerobic organic carbon degradation in the seabed.

F Beulig1, H Røy2, C Glombitza2,3, B B Jørgensen1.   

Abstract

The degradation of organic matter in the anoxic seabed proceeds through a complex microbial network in which the terminal steps are dominated by oxidation with sulfate or conversion into methane and CO2 The controls on pathway and rate of the degradation process in different geochemical zones remain elusive. Radiotracer techniques were used to perform measurements of sulfate reduction, methanogenesis, and acetate oxidation with unprecedented sensitivity throughout Holocene sediment columns from the Baltic Sea. We found that degradation rates transition continuously from the sulfate to the methane zone, thereby demonstrating that terminal steps do not exert feedback control on upstream hydrolytic and fermentative processes, as previously suspected. Acetate was a key intermediate for carbon mineralization in both zones. However, acetate was not directly converted into methane. Instead, an additional subterminal step converted acetate to CO2 and reducing equivalents, such as H2, which then fed autotrophic reduction of CO2 to methane.

Entities:  

Keywords:  marine sediment; methanogenesis; organic matter mineralization; sulfate reduction; syntrophic acetate oxidation

Mesh:

Substances:

Year:  2017        PMID: 29279408      PMCID: PMC5777060          DOI: 10.1073/pnas.1715789115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  11 in total

1.  Evidence for anaerobic syntrophic acetate oxidation during methane production in the profundal sediment of subtropical Lake Kinneret (Israel).

Authors:  B Nüsslein; K J Chin; W Eckert; R Conrad
Journal:  Environ Microbiol       Date:  2001-07       Impact factor: 5.491

2.  Acetate oxidation is the dominant methanogenic pathway from acetate in the absence of Methanosaetaceae.

Authors:  Dimitar Karakashev; Damien J Batstone; Eric Trably; Irini Angelidaki
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

3.  Syntrophic acetate-oxidizing microbes in methanogenic environments.

Authors:  Satoshi Hattori
Journal:  Microbes Environ       Date:  2008       Impact factor: 2.912

Review 4.  Organic acids in hydrothermal solutions: standard molal thermodynamic properties of carboxylic acids and estimates of dissociation constants at high temperatures and pressures.

Authors:  E L Shock
Journal:  Am J Sci       Date:  1995-05       Impact factor: 5.772

5.  Biogeochemistry and biodiversity of methane cycling in subsurface marine sediments (Skagerrak, Denmark).

Authors:  R John Parkes; Barry A Cragg; Natasha Banning; Fiona Brock; Gordon Webster; John C Fry; Ed Hornibrook; Richard D Pancost; Sam Kelly; Nina Knab; Bo B Jørgensen; Joachim Rinna; Andrew J Weightman
Journal:  Environ Microbiol       Date:  2007-05       Impact factor: 5.491

6.  Methanogenesis in marine sediments.

Authors:  James G Ferry; Daniel J Lessner
Journal:  Ann N Y Acad Sci       Date:  2008-03       Impact factor: 5.691

7.  Acetogenesis in the energy-starved deep biosphere - a paradox?

Authors:  Mark Alexander Lever
Journal:  Front Microbiol       Date:  2012-01-13       Impact factor: 5.640

8.  Formate, acetate, and propionate as substrates for sulfate reduction in sub-arctic sediments of Southwest Greenland.

Authors:  Clemens Glombitza; Marion Jaussi; Hans Røy; Marit-Solveig Seidenkrantz; Bente A Lomstein; Bo B Jørgensen
Journal:  Front Microbiol       Date:  2015-08-24       Impact factor: 5.640

9.  Methanogenic archaea and sulfate reducing bacteria co-cultured on acetate: teamwork or coexistence?

Authors:  Derya Ozuolmez; Hyunsoo Na; Mark A Lever; Kasper U Kjeldsen; Bo B Jørgensen; Caroline M Plugge
Journal:  Front Microbiol       Date:  2015-05-27       Impact factor: 5.640

10.  Carbon dioxide concentration dictates alternative methanogenic pathways in oil reservoirs.

Authors:  Daisuke Mayumi; Jan Dolfing; Susumu Sakata; Haruo Maeda; Yoshihiro Miyagawa; Masayuki Ikarashi; Hideyuki Tamaki; Mio Takeuchi; Cindy H Nakatsu; Yoichi Kamagata
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  18 in total

1.  Interactions of sulfur and methane-oxidizing bacteria in tropical estuarine sediments.

Authors:  A Sam Kamaleson; Maria Judith Gonsalves; Delcy Rosy Nazareth
Journal:  Environ Monit Assess       Date:  2019-07-16       Impact factor: 2.513

2.  Cryptic CH4 cycling in the sulfate-methane transition of marine sediments apparently mediated by ANME-1 archaea.

Authors:  F Beulig; H Røy; S E McGlynn; B B Jørgensen
Journal:  ISME J       Date:  2018-09-07       Impact factor: 10.302

3.  Widespread energy limitation to life in global subseafloor sediments.

Authors:  J A Bradley; S Arndt; J P Amend; E Burwicz; A W Dale; M Egger; D E LaRowe
Journal:  Sci Adv       Date:  2020-08-05       Impact factor: 14.136

Review 4.  Physiological limits to life in anoxic subseafloor sediment.

Authors:  William D Orsi; Bernhard Schink; Wolfgang Buckel; William F Martin
Journal:  FEMS Microbiol Rev       Date:  2020-03-01       Impact factor: 16.408

5.  Mineralization versus fermentation: evidence for two distinct anaerobic bacterial degradation pathways for dichloromethane.

Authors:  Gao Chen; Alexander R Fisch; Caleb M Gibson; E Erin Mack; Edward S Seger; Shawn R Campagna; Frank E Löffler
Journal:  ISME J       Date:  2020-01-06       Impact factor: 10.302

6.  A largely invariant marine dissolved organic carbon reservoir across Earth's history.

Authors:  Mojtaba Fakhraee; Lidya G Tarhan; Noah J Planavsky; Christopher T Reinhard
Journal:  Proc Natl Acad Sci U S A       Date:  2021-10-05       Impact factor: 11.205

7.  A Critical Look at the Combined Use of Sulfur and Oxygen Isotopes to Study Microbial Metabolisms in Methane-Rich Environments.

Authors:  Gilad Antler; André Pellerin
Journal:  Front Microbiol       Date:  2018-04-06       Impact factor: 5.640

8.  Single-Cell Genomics Reveals a Diverse Metabolic Potential of Uncultivated Desulfatiglans-Related Deltaproteobacteria Widely Distributed in Marine Sediment.

Authors:  Lara M Jochum; Lars Schreiber; Ian P G Marshall; Bo B Jørgensen; Andreas Schramm; Kasper U Kjeldsen
Journal:  Front Microbiol       Date:  2018-09-03       Impact factor: 5.640

9.  Formation of Large Native Sulfur Deposits Does Not Require Molecular Oxygen.

Authors:  Amanda L Labrado; Benjamin Brunner; Stefano M Bernasconi; Jörn Peckmann
Journal:  Front Microbiol       Date:  2019-01-25       Impact factor: 5.640

10.  Long-term succession in a coal seam microbiome during in situ biostimulation of coalbed-methane generation.

Authors:  Sabrina Beckmann; Alison W S Luk; Maria-Luisa Gutierrez-Zamora; Nur Hazlin Hazrin Chong; Torsten Thomas; Matthew Lee; Michael Manefield
Journal:  ISME J       Date:  2018-10-15       Impact factor: 10.302

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