Literature DB >> 29277459

Design, synthesis, and evaluation of novel inhibitors for wild-type human serine racemase.

Satoyuki Takahara1, Kiyomi Nakagawa2, Tsugumi Uchiyama3, Tomoyuki Yoshida4, Kazunori Matsumoto5, Yasuo Kawasumi5, Mineyuki Mizuguchi4, Takayuki Obita5, Yurie Watanabe6, Daichi Hayakawa6, Hiroaki Gouda6, Hisashi Mori4, Naoki Toyooka7.   

Abstract

Most of the endogenous free d-serine (about 90%) in the brain is produced by serine racemase (SR). d-Serine in the brain is involved in neurodegenerative disorders and epileptic states as an endogenous co-agonist of the NMDA-type glutamate receptor. Thus, SR inhibitors are expected to be novel therapeutic candidates for the treatment of these disorders. In this study, we solved the crystal structure of wild-type SR, and tried to identify a new inhibitor of SR by in silico screening using the structural information. As a result, we identified two hit compounds by their in vitro evaluations using wild-type SR. Based on the structure of the more potent hit compound 1, we synthesized 15 derivatives and evaluated their inhibitory activities against wild-type SR. Among them, the compound 9C showed relatively high inhibitory potency for wild-type SR. Compound 9C was a more potent inhibitor than compound 24, which was synthesized by our group based upon the structural information of the mutant-type SR.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  In silico; In vitro; Serine racemase inhibitor; d-Serine

Mesh:

Substances:

Year:  2017        PMID: 29277459     DOI: 10.1016/j.bmcl.2017.12.021

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  6 in total

1.  Human Serine Racemase Weakly Binds the Third PDZ Domain of PSD-95.

Authors:  Roberta Giaccari; Francesco Marchesani; Carlotta Compari; Emilia Fisicaro; Andrea Mozzarelli; Barbara Campanini; Stefano Bettati; Stefano Bruno; Serena Faggiano
Journal:  Int J Mol Sci       Date:  2022-04-29       Impact factor: 6.208

2.  Conformational flexibility within the small domain of human serine racemase.

Authors:  Chloe R Koulouris; Benjamin D Bax; John R Atack; S Mark Roe
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-02-03       Impact factor: 1.056

3.  Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.

Authors:  Chloe R Koulouris; Sian E Gardiner; Tessa K Harris; Karen T Elvers; S Mark Roe; Jason A Gillespie; Simon E Ward; Olivera Grubisha; Robert A Nicholls; John R Atack; Benjamin D Bax
Journal:  Commun Biol       Date:  2022-04-11

Review 4.  The Energy Landscape of Human Serine Racemase.

Authors:  Samanta Raboni; Marialaura Marchetti; Serena Faggiano; Barbara Campanini; Stefano Bruno; Francesco Marchesani; Marilena Margiotta; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2019-01-09

5.  Accelerated identification of serine racemase inhibitor from Centella asiatica.

Authors:  Komal Rani; Mitali Tyagi; Mohit Mazumder; Akanksha Singh; Annaian Shanmugam; Krishna Dalal; Manoj Pillai; Gourinath Samudrala; Saroj Kumar; Alagiri Srinivasan
Journal:  Sci Rep       Date:  2020-03-13       Impact factor: 4.379

6.  d-Serine controls epidermal vesicle release via NMDA receptor, allowing tissue migration during the metamorphosis of the chordate Ciona.

Authors:  Gabriel Krasovec; Akiko Hozumi; Tomoyuki Yoshida; Takayuki Obita; Mayuko Hamada; Akira Shiraishi; Honoo Satake; Takeo Horie; Hisashi Mori; Yasunori Sasakura
Journal:  Sci Adv       Date:  2022-03-11       Impact factor: 14.136

  6 in total

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