Literature DB >> 29264374

Time course gene expression data in colon of mice after exposure to food-grade E171.

Héloïse Proquin1, Marlon J Jetten1, Marloes C M Jonkhout1, Luis G Garduño-Balderas2, Jacob J Briedé1, Theo M de Kok1, Yolanda I Chirino2,3, Henk van Loveren1.   

Abstract

We investigated gene expression responses in BALB/c mice exposed by gavage to 5 mg/kg bw/day of E171 for 2, 7, 14 and 21 days. Food additive E171 (titanium dioxide) has been shown to induce oxidative stress and DNA damage in vitro as well as facilitating growth of colorectal tumours in vivo. Full genome expression changes of the colon of mice were investigated by using Agilent SurePrint G3 mouse Gene exp 60kv2 microarrays slides. The data presented in this DiB include all differentially expressed for each time point with EntrezGeneID, gene symbols, gene names and Log2FC as well as genes included in pathways after over-representation analysis in ConsensusPathDataBase. The functions of these genes in relation to the colon were described in our associated article (Proquin et al., 2017 in press) [1]. Raw and normalized gene expression data are available through NCBI GEO (GEO accession: GSE92563).

Entities:  

Year:  2017        PMID: 29264374      PMCID: PMC5726758          DOI: 10.1016/j.dib.2017.11.067

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


  4 in total

1.  Titanium dioxide nanoparticles in food and personal care products.

Authors:  Alex Weir; Paul Westerhoff; Lars Fabricius; Kiril Hristovski; Natalie von Goetz
Journal:  Environ Sci Technol       Date:  2012-02-08       Impact factor: 9.028

2.  Analyzing and interpreting genome data at the network level with ConsensusPathDB.

Authors:  Ralf Herwig; Christopher Hardt; Matthias Lienhard; Atanas Kamburov
Journal:  Nat Protoc       Date:  2016-09-08       Impact factor: 13.491

3.  Characterization of titanium dioxide nanoparticles in food products: analytical methods to define nanoparticles.

Authors:  Ruud J B Peters; Greet van Bemmel; Zahira Herrera-Rivera; Hans P F G Helsper; Hans J P Marvin; Stefan Weigel; Peter C Tromp; Agnes G Oomen; Anton G Rietveld; Hans Bouwmeester
Journal:  J Agric Food Chem       Date:  2014-06-30       Impact factor: 5.279

4.  The ConsensusPathDB interaction database: 2013 update.

Authors:  Atanas Kamburov; Ulrich Stelzl; Hans Lehrach; Ralf Herwig
Journal:  Nucleic Acids Res       Date:  2012-11-11       Impact factor: 16.971

  4 in total
  2 in total

1.  Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials.

Authors:  Laura Aliisa Saarimäki; Antonio Federico; Iseult Lynch; Anastasios G Papadiamantis; Andreas Tsoumanis; Georgia Melagraki; Antreas Afantitis; Angela Serra; Dario Greco
Journal:  Sci Data       Date:  2021-02-08       Impact factor: 6.444

Review 2.  Nanoparticle Effects on Stress Response Pathways and Nanoparticle-Protein Interactions.

Authors:  Shana J Cameron; Jessica Sheng; Farah Hosseinian; William G Willmore
Journal:  Int J Mol Sci       Date:  2022-07-19       Impact factor: 6.208

  2 in total

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