| Literature DB >> 29262306 |
Liqiang Zhong1, Minghua Wang2, Daming Li2, Shengkai Tang2, Tongqing Zhang2, Wenji Bian2, Xiaohui Chen3.
Abstract
Herein, the complete mitochondrial genome of Odontobutis haifengensis was sequenced for the first time. The O. haifengensis mitogenome was 17,016bp in length and included 13 protein-coding genes, 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs), and a control region (CR). The genome organization, base composition, codon usage, and gene rearrangement was similar to other Odontobutis species. Furthermore, a tRNA gene rearrangement within the SLH cluster was found to be identical to other Odontobutis species. Moreover, the gene order and the positions of additional intergenic non-coding regions suggests that the observed unique gene rearrangement resulted from a tandem duplication and random loss of large-scale gene regions. Additionally, phylogenetic analysis showed that Odontobutis species form a monophyletic clade due to the conserved mitochondrial gene rearrangement. This study provides useful information that aids in a better understanding of mitogenomic diversity and evolutionary patterns of Odontobutidae species.Entities:
Keywords: Gene rearrangement; Mitochondrial genome; Odontobutis haifengensis; Phylogenetic analysis
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Year: 2017 PMID: 29262306 DOI: 10.1016/j.ygeno.2017.12.008
Source DB: PubMed Journal: Genomics ISSN: 0888-7543 Impact factor: 5.736