Literature DB >> 29253327

A Responsive "Nano String Light" for Highly Efficient mRNA Imaging in Living Cells via Accelerated DNA Cascade Reaction.

Kewei Ren1, Yifan Xu1, Ying Liu1, Min Yang2, Huangxian Ju1.   

Abstract

Nonenzymatic DNA catalytic amplification strategies have greatly benefited bioanalysis. However, long period incubation is usually required due to its relatively low reaction rate and efficiency, which limits its in vivo application. Here we design a responsive DNA nano string light (DNSL) by interval hybridization of modified hairpin DNA probe pairs to a DNA nanowire generated by rolling circle amplification and realize accelerated DNA cascade reaction (DCR) for fast and highly efficient mRNA imaging in living cells. Target mRNA initiates interval hybridization of two paired hairpin probes sequentially along the DNA nanowire and results in instant lighting up of the whole DNA nanowire with high signal gain due to the fast opening of all the self-quenched hairpins. The reaction time is about 6.7 times shorter compared with a regular DNA cascade reaction due to the acceleration based on domino effect. The cell delivery is achieved by modifying one of the hairpin probes with folic acid, and this intracellular imaging strategy is verified using human HeLa cells and intracellular survivin mRNA with a series of suppressed expressions as model, which provides a useful platform for fast and highly efficient detection of low-abundance nucleic acids in living cells.

Entities:  

Keywords:  DNA cascade reaction; DNA nano string light; confined space; mRNA imaging; nucleic acid amplification

Mesh:

Substances:

Year:  2017        PMID: 29253327     DOI: 10.1021/acsnano.7b06200

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  10 in total

Review 1.  Nucleic-Acid Structures as Intracellular Probes for Live Cells.

Authors:  Devleena Samanta; Sasha B Ebrahimi; Chad A Mirkin
Journal:  Adv Mater       Date:  2019-07-04       Impact factor: 30.849

2.  A novel binding-induced DNAzyme motor triggered by survivin mRNA.

Authors:  Chang Liu; Jiyu Deng; Juan Yi; Ru Zhang; Lixin Chen; Xin Fu; Shuzhen Liao; Wenjun Yi; Guoqiang Zou; Hai Yang
Journal:  Anal Bioanal Chem       Date:  2022-06-29       Impact factor: 4.478

3.  In Situ Genetically Cascaded Amplification for Imaging RNA Subcellular Locations.

Authors:  Kewei Ren; Rigumula Wu; Aruni P K K Karunanayake Mudiyanselage; Qikun Yu; Bin Zhao; Yiwen Xie; Yousef Bagheri; Qian Tian; Mingxu You
Journal:  J Am Chem Soc       Date:  2020-01-30       Impact factor: 15.419

4.  A Genetically Encoded RNA Photosensitizer for Targeted Cell Regulation.

Authors:  Kewei Ren; Puspam Keshri; Rigumula Wu; Zhining Sun; Qikun Yu; Qian Tian; Bin Zhao; Yousef Bagheri; Yiwen Xie; Mingxu You
Journal:  Angew Chem Int Ed Engl       Date:  2020-10-07       Impact factor: 15.336

Review 5.  The Growing Development of DNA Nanostructures for Potential Healthcare-Related Applications.

Authors:  Divita Mathur; Igor L Medintz
Journal:  Adv Healthc Mater       Date:  2019-03-07       Impact factor: 11.092

6.  pH-responsive DNA nanomicelles for chemo-gene synergetic therapy of anaplastic large cell lymphoma.

Authors:  Yuwei Li; Shuzhen Yue; Jingyu Cao; Chengzhan Zhu; Yixiu Wang; Xin Hai; Weiling Song; Sai Bi
Journal:  Theranostics       Date:  2020-07-09       Impact factor: 11.556

7.  Three-dimensional DNA tweezers serve as modular DNA intelligent machines for detection and regulation of intracellular microRNA.

Authors:  Lin Zhou; Mingxuan Gao; Weiling Fu; Yunxia Wang; Dan Luo; Kai Chang; Ming Chen
Journal:  Sci Adv       Date:  2020-05-29       Impact factor: 14.136

8.  A DNA nanowire based localized catalytic hairpin assembly reaction for microRNA imaging in live cells.

Authors:  Qiaomei Wei; Jin Huang; Jing Li; Jiaoli Wang; Xiaohai Yang; Jianbo Liu; Kemin Wang
Journal:  Chem Sci       Date:  2018-08-20       Impact factor: 9.825

9.  Sensitively distinguishing intracellular precursor and mature microRNA abundance.

Authors:  Fan Yang; Yaru Cheng; Yu Cao; Haifeng Dong; Huiting Lu; Kai Zhang; Xiangdan Meng; Conghui Liu; Xueji Zhang
Journal:  Chem Sci       Date:  2018-11-28       Impact factor: 9.825

Review 10.  Development of the DNA-based biosensors for high performance in detection of molecular biomarkers: More rapid, sensitive, and universal.

Authors:  Qiong Wang; Jing Wang; Yan Huang; Yichen Du; Yi Zhang; Yunxi Cui; De-Ming Kong
Journal:  Biosens Bioelectron       Date:  2021-10-29       Impact factor: 10.618

  10 in total

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