Literature DB >> 29250397

Synthesis and crystal structure of a new pyridinium bromide salt: 4-methyl-1-(3-phen-oxy-prop-yl)pyridinium bromide.

Musa A Said1, Mohamed R Aouad1,2, David L Hughes3, Meshal A Almehmadi1, Mouslim Messali1.   

Abstract

In the cation of the title mol-ecular salt, C15H18NOBr-, the pyridinium and phenyl rings are inclined to one another by 11.80 (8)°. In the crystal, the Br- anion is linked to the cation by a C-H⋯Br hydrogen bond. The cations stack along the b-axis direction and are linked by further C-H⋯Br inter-actions, and offset π-π inter-actions [inter-centroid distances = 3.5733 (19) and 3.8457 (19) Å], forming slabs parallel to the ab plane. The effects of the C-H⋯X- inter-action on the NMR signals of the ortho- and meta-pyridinium protons in a series of related ionic liquids, viz. 4-methyl-1-(4-phen-oxy-but-yl)pyridin-1-ium salts, are reported and discussed.

Entities:  

Keywords:  crystal structure; halide; hydrogen bonding; ionic liquids; pyridinium salts; π–π inter­actions

Year:  2017        PMID: 29250397      PMCID: PMC5730234          DOI: 10.1107/S2056989017015481

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

In the last two decades, ionic liquids (ILs) have gained considerable inter­est as excellent alternatives to volatile organic compounds (VOCs) because of their unusual range of properties such as negligible vapour pressure, excellent thermal stability in a wide temperature range, no flammability, high ionic conductivity and solvation ability (Davis, 2004 ▸). A wide range of applications using ionic liquids has been reported in many areas such as solvents in organic synthesis (Wang et al., 2007 ▸), media for electrodeposition of metals (Endres, 2002 ▸), corrosion inhibitors (Ibrahim et al., 2011 ▸), electrolytes for electrochemical devices such as batteries (Brennecke & Maginn, 2001 ▸), catalysts (Shi et al. 2004 ▸), in fuel cells (De Souza et al., 2006 ▸), in polymer science (Kubisa, 2004 ▸), and in dye-sensitized solar cells (Kawano et al., 2004 ▸). In view of the above mentioned, and of our ongoing research inter­est in the synthesis of ionic liquids (Messali, 2016 ▸, 2015 ▸; Messali et al., 2014 ▸), we present in this study the preparation and the crystal structure of the novel title pyridinium halide salt, 4-methyl-1-(3-phen­oxy­prop­yl)pyridinium bromide.

Structural commentary

The mol­ecular structure of the title pyridinium bromide salt is illustrated in Fig. 1 ▸. There is a weak intra­molecular C—H⋯O contact present, with an H⋯O distance of 2.52 Å and a C—H⋯O angle of only 100° (see Table 1 ▸). The cation consists of two planar groups, a pyridinium ring (N11/C12–C16) and a phenyl group (C1–C6); atom N11 has the expected planar–trigonal conformation. The two aromatic rings are inclined to one another by 11.80 (8)° and there is a step of ca 1.35 Å between the two groups along the C9—C10 bond, see Fig. 2 ▸. The C1—O7, C8—C9, C10—N11 and C14—C17 bonds are roughly parallel, so that the two aromatic groups are at opposite ends of an approximately linear cation. This is in contrast to the alignment found in 1-[2-(5-nitro-1H-indol-2-yl)phen­yl]methyl­pyridinium chloride where the cation is U-shaped with the pyridinium ring lying over the pyrrolo ring of the indole moiety (Bremner et al., 2011 ▸), possibly as a result of electronic inter­actions between the two rings.
Figure 1

The mol­ecular structure of the component ions of the title salt, indicating the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.

Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10A⋯O70.972.522.850 (3)100
C10—H10B⋯Br1i 0.972.893.735 (3)146
C10—H10A⋯Br10.973.114.043 (3)163
C12—H12⋯Br10.933.083.940 (3)154
C15—H15⋯Br1ii 0.933.073.931 (3)155
C17—H17B⋯Br1ii 0.963.083.956 (4)152

Symmetry codes: (i) ; (ii) .

Figure 2

A view of the cation showing the step formation about bond C9—C10 and the approximately parallel ring planes.

Supra­molecular features

In the crystal, the bromide anion is linked to the cation by a C10—H10B⋯Br1i hydrogen bond (Table 1 ▸). The anion is surrounded by three other cations with the most significant C-–H⋯Br short contacts varying from ca 3.07 to 3.11 Å (Table 1 ▸). The bromide ions are aligned approximately in the planes of the aromatic rings, which is similar to the arrangement found in N-benzyl­pyridinium bromide (Anders et al., 1990 ▸), and in contrast to those in a series of N-(penta­fluoro­benz­yl)pyridinium salts where the anion faces the aromatic rings with formation of anion–π inter­actions (Giese et al., 2014 ▸). The cations stack head-to-tail, in pairs about centres of symmetry, along the b-axis direction with the aromatic rings being inclined slightly to one another [α = 11.80 (8)° within a pair and 7.52 (16)° between pairs]. As shown in Fig. 3 ▸, the pairs are linked by offset π–π inter­actions, forming slabs parallel to (001): Cg1⋯Cg2iii = 3.8457 (19) Å within a pair, and Cg1⋯Cg2iv = 3.5733 (19) Å between pairs; Cg1 and Cg2 are the centroids of rings C1—C6 and N11/C12–C16, respect­ively; symmetry codes: (iii) 1 − x, 1 − y, 1 − z; (iv) x − ,  − y, 1 − z.
Figure 3

Crystal packing viewed along the b axis, showing the stacking of the phenyl and pyridinium groups along that axis.

C—H⋯anion inter­actions in the 1H NMR spectrum

The C—H⋯anion inter­actions are clearly manifested in the 1H NMR spectrum (see Section 5. Synthesis and crystallization). Such an effect has previously been shown by a solution study of the C—H⋯Br inter­action on the signals of the ortho- and meta-pyridinium protons in the 1H NMR spectra of a series of N-(penta­fluoro­benz­yl)pyridinium salts (Giese et al., 2014 ▸). The present study in D2O solvent involves only the pyridinium protons (Ha and Hb) of a series of 4-methyl-1-(4-phen­oxy­but­yl)pyridin-1-ium X − ionic liquids, and the title compound, shown in Fig. 4 ▸. The results, given in Table 2 ▸, reveal significant shifts for the hydrogen atom Ha in various pyridinium salts, whereas hydrogen atom Hb is only slightly affected by the different counter-anions (Messali, 2015 ▸); viz. the study reveals a range of 0.75 p.p.m. for the signals of the ortho-pyridinium protons (Ha) and a shorter range of 0.29 p.p.m. for meta-pyridinium protons (Hb). The determination of the causes behind this variation remains a challenging task for our research group.
Figure 4

A series of ionic liquids: (a) 4-methyl-1-(4-phen­oxy­but­yl)pyridin-1-ium salts with various counter-anions; (b) this study: 4-methyl-1-(3-phen­oxy­prop­yl)pyridinium bromide.

Table 2

1H NMR chemical shifts (D2O, δ p.p.m.) for the pyridinium hydrogen atoms (Ha and Hb) of a series of ionic liquids (1–7)* and the title salt

Ionic liquidAnionChemical shift for Ha Chemical shift for Hb
1Br d, 9.23 d, 7.67
2NO3 d, 9.22 d, 7.66
3CF3CO2 d, 9.09 d, 7.65
4PF6 d, 8.94 d, 7.94
5SCN d, 8.82 d, 7.80
6N(CN)2 d, 8.91 d, 7.75
7BF4 d, 8.60 d, 7.69
This studyBr d, 8.48 d, 7.66

*Messali (2015 ▸).

Synthesis and crystallization

The synthesis of the title compound is illustrated in Fig. 5 ▸. To a solution of 1 g of 4-picoline (10.7 mmol) in 20 ml of toluene, were added 2.53 g of (3-bromo­prop­oxy)benzene (118 mmol) at room temperature, followed by stirring at 355 K for 18 h. The completion of the reaction was marked by the separation of a solid from the initially obtained clear and homogeneous mixture of the starting materials. The product was isolated by filtration to remove the unreacted starting materials and solvent. Subsequently, the title picolinium salt was washed with ethyl acetate. The product was finally dried at reduced pressure to remove all volatile organic compounds. The title compound was obtained as a white solid. Colourless prismatic crystals were obtained by slow evaporation of a solution in di­chloro­methane.
Figure 5

Synthesis of the title compound.

Spectroscopic and analytical data: 1H NMR (D2O, 400 MHz): δ = 2.34 (quint, J = 7.6 Hz, 2H), 2.50 (s, 3H), 3.98 (t, J = 7.6 Hz, 2H), 4.60 (t, J = 7.6 Hz, 2H), 6.72 (d, 2Ar–H), 6.91 (t, 1Ar–H), 7.21 (t, 2Ar–H), 7.66 (d, 2Ar–H), 8.48 (d, 2Ar–H); 13C NMR (D2O, 100 MHz,): δ = 21.2 (CH3), 29.4 (CH2), 58.5 (CH2), 64.5 (CH2), 114.4 (CH), 121.5 (CH), 128.5 (CH), 129.8 (CH), 143.2 (CH), 157.4 (C), 160.1 (C); IR (KBr) νmax 3132 (C—H Ar), 1600–1470 (C=C), 1167(C—N), 1078 (C—O) cm−1; LCMS (M +)–Br− 228.1 found for C15H18NO+. Elemental analysis for C15H18BrNO (308.21); calculated C 58.45, H 5.89, N 4.54%. Found: C 58.51, H 5.82, N 4.49%.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. The H atoms were included in idealized positions and treated as riding atoms: C—H = 0.93–0.97 Å with U iso(H) = 1.5U eq(C-meth­yl) and = 1.2U eq(C) for other H atoms.
Table 3

Experimental details

Crystal data
Chemical formulaC15H18NO+·Br
M r 308.21
Crystal system, space groupOrthorhombic, P b c a
Temperature (K)295
a, b, c (Å)10.3615 (3), 13.8916 (6), 20.2121 (8)
V3)2909.29 (19)
Z 8
Radiation typeMo Kα
μ (mm−1)2.82
Crystal size (mm)0.60 × 0.19 × 0.10
 
Data collection
DiffractometerOxford Diffraction Xcalibur 3/Sapphire3 CCD
Absorption correctionMulti-scan (CrysAlis PRO; Agilent, 2014)
T min, T max 0.529, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections38980, 2560, 2212
R int 0.048
(sin θ/λ)max−1)0.595
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.045, 0.087, 1.20
No. of reflections2560
No. of parameters164
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.27, −0.25

Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and ORTEP-3 for Windows and WinGX (Farrugia, 2012 ▸).

Crystal structure: contains datablock(s) I, Global. DOI: 10.1107/S2056989017015481/su5395sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989017015481/su5395Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017015481/su5395Isup3.cdx Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017015481/su5395Isup4.cml CCDC reference: 1581713 Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H18NO+·BrDx = 1.407 Mg m3
Mr = 308.21Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PbcaCell parameters from 5457 reflections
a = 10.3615 (3) Åθ = 3.2–25.6°
b = 13.8916 (6) ŵ = 2.82 mm1
c = 20.2121 (8) ÅT = 295 K
V = 2909.29 (19) Å3Prism, colourless
Z = 80.60 × 0.19 × 0.10 mm
F(000) = 1264
Oxford Diffraction Xcalibur 3/Sapphire3 CCD diffractometer2560 independent reflections
Radiation source: Enhance (Mo) X-ray Source2212 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.048
Detector resolution: 16.0050 pixels mm-1θmax = 25.0°, θmin = 3.6°
Thin slice φ and ω scansh = −12→12
Absorption correction: multi-scan (CrysAlis Pro; Agilent, 2014)k = −16→16
Tmin = 0.529, Tmax = 1.000l = −24→24
38980 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H-atom parameters constrained
S = 1.20w = 1/[σ2(Fo2) + (0.0313P)2 + 1.5286P] where P = (Fo2 + 2Fc2)/3
2560 reflections(Δ/σ)max = 0.001
164 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Br10.33702 (3)0.68529 (3)0.38455 (2)0.05802 (14)
C10.3412 (3)0.6101 (2)0.61560 (14)0.0449 (7)
C20.2231 (3)0.6169 (2)0.58402 (17)0.0497 (8)
H20.21740.60700.53860.060*
C30.1146 (4)0.6382 (3)0.6199 (2)0.0665 (10)
H30.03520.64210.59860.080*
C40.1213 (4)0.6540 (3)0.6864 (2)0.0768 (12)
H40.04710.66940.71010.092*
C50.2377 (4)0.6470 (3)0.71827 (19)0.0756 (11)
H50.24220.65780.76360.091*
C60.3494 (3)0.6241 (3)0.68326 (16)0.0567 (9)
H60.42810.61820.70500.068*
O70.44380 (18)0.58949 (16)0.57589 (10)0.0516 (6)
C80.5707 (3)0.5894 (2)0.60379 (14)0.0487 (8)
H8A0.57920.53810.63600.058*
H8B0.58800.65030.62560.058*
C90.6631 (3)0.5744 (2)0.54734 (16)0.0514 (8)
H9A0.64270.51450.52500.062*
H9B0.75040.56960.56440.062*
C100.6554 (3)0.6566 (2)0.49855 (15)0.0478 (7)
H10A0.56870.66020.48060.057*
H10B0.67320.71670.52130.057*
N110.7491 (2)0.64405 (17)0.44343 (11)0.0400 (6)
C120.7086 (3)0.6251 (2)0.38199 (15)0.0440 (7)
H120.62060.62030.37340.053*
C130.7952 (3)0.6126 (2)0.33169 (15)0.0469 (7)
H130.76570.59960.28920.056*
C140.9257 (3)0.6192 (2)0.34333 (15)0.0439 (7)
C150.9652 (3)0.6400 (2)0.40727 (15)0.0500 (8)
H151.05270.64490.41690.060*
C160.8761 (3)0.6533 (2)0.45620 (16)0.0493 (8)
H160.90330.66880.49870.059*
C171.0219 (3)0.6050 (3)0.28885 (17)0.0680 (10)
H17A1.04310.53790.28540.102*
H17B1.09860.64110.29840.102*
H17C0.98560.62680.24780.102*
U11U22U33U12U13U23
Br10.0428 (2)0.0664 (2)0.0649 (2)−0.00036 (16)0.00019 (15)−0.00230 (18)
C10.0509 (17)0.0394 (16)0.0444 (17)−0.0034 (14)0.0090 (15)0.0015 (14)
C20.0513 (18)0.0434 (19)0.0544 (18)0.0051 (15)0.0028 (16)0.0044 (15)
C30.0530 (19)0.057 (2)0.089 (3)0.0066 (18)0.014 (2)0.012 (2)
C40.073 (3)0.068 (3)0.089 (3)0.002 (2)0.043 (2)0.005 (2)
C50.104 (3)0.069 (3)0.053 (2)−0.011 (2)0.030 (2)−0.0030 (19)
C60.066 (2)0.062 (2)0.0421 (18)−0.0088 (17)0.0079 (16)−0.0033 (16)
O70.0421 (11)0.0718 (16)0.0410 (11)0.0003 (10)0.0042 (10)−0.0120 (11)
C80.0472 (17)0.054 (2)0.0446 (17)−0.0009 (15)−0.0007 (14)0.0019 (15)
C90.0454 (17)0.0531 (19)0.0557 (19)0.0045 (15)0.0050 (15)0.0003 (16)
C100.0431 (16)0.0490 (18)0.0513 (18)0.0030 (14)0.0041 (14)−0.0031 (15)
N110.0347 (12)0.0386 (14)0.0468 (14)0.0002 (10)0.0003 (11)−0.0012 (11)
C120.0374 (15)0.0456 (18)0.0489 (18)−0.0023 (13)−0.0103 (14)0.0005 (15)
C130.0490 (17)0.0508 (19)0.0407 (16)−0.0033 (15)−0.0055 (14)−0.0008 (14)
C140.0466 (16)0.0400 (17)0.0452 (17)−0.0042 (14)0.0036 (14)0.0014 (14)
C150.0324 (15)0.062 (2)0.0554 (19)−0.0070 (15)−0.0019 (14)−0.0028 (16)
C160.0410 (16)0.061 (2)0.0462 (18)−0.0061 (15)−0.0059 (14)−0.0058 (16)
C170.062 (2)0.082 (3)0.059 (2)−0.007 (2)0.0151 (18)−0.0050 (19)
C1—O71.362 (3)C9—H9B0.9700
C1—C21.383 (4)C10—N111.488 (4)
C1—C61.384 (4)C10—H10A0.9700
C2—C31.371 (5)C10—H10B0.9700
C2—H20.9300N11—C121.337 (3)
C3—C41.364 (5)N11—C161.347 (4)
C3—H30.9300C12—C131.368 (4)
C4—C51.371 (6)C12—H120.9300
C4—H40.9300C13—C141.375 (4)
C5—C61.393 (5)C13—H130.9300
C5—H50.9300C14—C151.386 (4)
C6—H60.9300C14—C171.498 (4)
O7—C81.431 (3)C15—C161.365 (4)
C8—C91.505 (4)C15—H150.9300
C8—H8A0.9700C16—H160.9300
C8—H8B0.9700C17—H17A0.9600
C9—C101.511 (4)C17—H17B0.9600
C9—H9A0.9700C17—H17C0.9600
O7—C1—C2115.6 (3)N11—C10—C9111.4 (2)
O7—C1—C6124.3 (3)N11—C10—H10A109.3
C2—C1—C6120.0 (3)C9—C10—H10A109.3
C3—C2—C1119.8 (3)N11—C10—H10B109.3
C3—C2—H2120.1C9—C10—H10B109.3
C1—C2—H2120.1H10A—C10—H10B108.0
C4—C3—C2120.9 (4)C12—N11—C16120.2 (2)
C4—C3—H3119.5C12—N11—C10120.9 (2)
C2—C3—H3119.5C16—N11—C10118.9 (2)
C3—C4—C5119.8 (4)N11—C12—C13120.6 (3)
C3—C4—H4120.1N11—C12—H12119.7
C5—C4—H4120.1C13—C12—H12119.7
C4—C5—C6120.6 (3)C12—C13—C14120.7 (3)
C4—C5—H5119.7C12—C13—H13119.7
C6—C5—H5119.7C14—C13—H13119.7
C1—C6—C5118.9 (3)C13—C14—C15117.6 (3)
C1—C6—H6120.6C13—C14—C17121.3 (3)
C5—C6—H6120.6C15—C14—C17121.1 (3)
C1—O7—C8119.0 (2)C16—C15—C14120.3 (3)
O7—C8—C9106.6 (2)C16—C15—H15119.9
O7—C8—H8A110.4C14—C15—H15119.9
C9—C8—H8A110.4N11—C16—C15120.6 (3)
O7—C8—H8B110.4N11—C16—H16119.7
C9—C8—H8B110.4C15—C16—H16119.7
H8A—C8—H8B108.6C14—C17—H17A109.5
C8—C9—C10110.9 (3)C14—C17—H17B109.5
C8—C9—H9A109.5H17A—C17—H17B109.5
C10—C9—H9A109.5C14—C17—H17C109.5
C8—C9—H9B109.5H17A—C17—H17C109.5
C10—C9—H9B109.5H17B—C17—H17C109.5
H9A—C9—H9B108.1
O7—C1—C2—C3−179.4 (3)C9—C10—N11—C12111.0 (3)
C6—C1—C2—C30.5 (5)C9—C10—N11—C16−69.8 (3)
C1—C2—C3—C40.7 (5)C16—N11—C12—C131.5 (4)
C2—C3—C4—C5−1.0 (6)C10—N11—C12—C13−179.3 (3)
C3—C4—C5—C60.0 (6)N11—C12—C13—C140.1 (5)
O7—C1—C6—C5178.5 (3)C12—C13—C14—C15−0.8 (5)
C2—C1—C6—C5−1.4 (5)C12—C13—C14—C17179.5 (3)
C4—C5—C6—C11.2 (5)C13—C14—C15—C160.0 (5)
C2—C1—O7—C8174.7 (3)C17—C14—C15—C16179.6 (3)
C6—C1—O7—C8−5.3 (4)C12—N11—C16—C15−2.4 (5)
C1—O7—C8—C9−174.5 (3)C10—N11—C16—C15178.4 (3)
O7—C8—C9—C1062.9 (3)C14—C15—C16—N111.6 (5)
C8—C9—C10—N11178.4 (2)
D—H···AD—HH···AD···AD—H···A
C10—H10A···O70.972.522.850 (3)100
C10—H10B···Br1i0.972.893.735 (3)146
C10—H10A···Br10.973.114.043 (3)163
C12—H12···Br10.933.083.940 (3)154
C15—H15···Br1ii0.933.073.931 (3)155
C17—H17B···Br1ii0.963.083.956 (4)152
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